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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
73.6
nTPM
Monaco:
220.3
nTPM
Schmiedel:
60.5
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
73.6
HPA sample
nTPM
gdT-cell nTPM: 39.9
Samples: 6
Max nTPM: 77.1
Min nTPM: 21.4
P10809_1007
45.2
P10809_1022
33.4
P10809_1041
77.1
P10809_1060
21.4
P10809_1077
23.1
P10809_1098
39.3
MAIT T-cell nTPM: 28.7
Samples: 6
Max nTPM: 53.2
Min nTPM: 19.6
P10809_1006
31.8
P10809_1024
53.2
P10809_1043
23.5
P10809_1062
19.8
P10809_1083
19.6
P10809_1097
24.2
Memory CD4 T-cell nTPM: 56.8
Samples: 6
Max nTPM: 82.0
Min nTPM: 38.9
P10809_1014
82.0
P10809_1026
51.1
P10809_1045
53.5
P10809_1064
38.9
P10809_1086
42.7
P10809_1113
72.5
Memory CD8 T-cell nTPM: 41.9
Samples: 5
Max nTPM: 65.9
Min nTPM: 22.1
P10809_1012
39.3
P10809_1027
65.9
P10809_1046
32.5
P10809_1065
22.1
P10809_1111
49.6
Naive CD4 T-cell nTPM: 71.3
Samples: 6
Max nTPM: 102.0
Min nTPM: 60.2
P10809_1015
66.2
P10809_1030
102.0
P10809_1049
60.2
P10809_1068
68.8
P10809_1085
63.5
P10809_1112
67.0
Naive CD8 T-cell nTPM: 47.5
Samples: 6
Max nTPM: 61.5
Min nTPM: 26.5
P10809_1016
41.5
P10809_1031
56.0
P10809_1050
47.0
P10809_1069
52.2
P10809_1087
26.5
P10809_1110
61.5
T-reg nTPM: 73.6
Samples: 6
Max nTPM: 105.0
Min nTPM: 55.8
P10809_1018
59.1
P10809_1037
67.2
P10809_1056
55.8
P10809_1075
80.4
P10809_1094
73.9
P10809_1106
105.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
220.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 163.5
Samples: 4
Max nTPM: 289.9
Min nTPM: 84.8
RHH5202_R3573
85.7
RHH5230_R3602
289.9
RHH5259_R3631
84.8
RHH5288_R3660
193.4
Effector memory CD8 T-cell nTPM: 111.4
Samples: 4
Max nTPM: 162.3
Min nTPM: 52.6
RHH5203_R3574
137.9
RHH5231_R3603
162.3
RHH5260_R3632
52.6
RHH5289_R3661
92.9
MAIT T-cell nTPM: 36.3
Samples: 4
Max nTPM: 59.6
Min nTPM: 0.0
RHH5233_R3605
47.1
RHH5205_R3576
38.4
RHH5262_R3634
59.6
RHH5297_R3663
0.0
Memory CD4 T-cell TFH nTPM: 183.6
Samples: 4
Max nTPM: 264.0
Min nTPM: 109.2
RHH5300_R3666
109.2
RHH5236_R3608
163.2
RHH5265_R3637
198.0
RHH5208_R3579
264.0
Memory CD4 T-cell Th1 nTPM: 206.2
Samples: 4
Max nTPM: 283.6
Min nTPM: 114.9
RHH5210_R3581
283.6
RHH5302_R3668
212.5
RHH5238_R3610
213.7
RHH5267_R3639
114.9
Memory CD4 T-cell Th1/Th17 nTPM: 165.3
Samples: 4
Max nTPM: 230.9
Min nTPM: 70.4
RHH5303_R3669
213.9
RHH5211_R3582
70.4
RHH5239_R3611
146.0
RHH5268_R3640
230.9
Memory CD4 T-cell Th17 nTPM: 147.0
Samples: 4
Max nTPM: 208.7
Min nTPM: 90.5
RHH5304_R3670
90.5
RHH5212_R3583
117.1
RHH5240_R3612
171.7
RHH5269_R3641
208.7
Memory CD4 T-cell Th2 nTPM: 167.2
Samples: 4
Max nTPM: 238.0
Min nTPM: 54.4
RHH5305_R3671
163.6
RHH5213_R3584
54.4
RHH5241_R3613
212.7
RHH5270_R3642
238.0
Naive CD4 T-cell nTPM: 197.8
Samples: 4
Max nTPM: 317.5
Min nTPM: 50.8
RHH5306_R3672
317.5
RHH5214_R3585
232.6
RHH5242_R3614
190.1
RHH5271_R3643
50.8
Naive CD8 T-cell nTPM: 164.8
Samples: 4
Max nTPM: 192.7
Min nTPM: 100.2
RHH5201_R3572
173.6
RHH5229_R3601
192.7
RHH5258_R3630
192.7
RHH5287_R3659
100.2
Non-Vd2 gdTCR nTPM: 45.2
Samples: 4
Max nTPM: 88.5
Min nTPM: 0.0
RHH5235_R3607
88.5
RHH5264_R3636
0.0
RHH5207_R3578
38.1
RHH5299_R3665
54.3
T-reg nTPM: 220.4
Samples: 4
Max nTPM: 263.1
Min nTPM: 180.7
RHH5301_R3667
180.7
RHH5237_R3609
263.1
RHH5266_R3638
238.0
RHH5209_R3580
199.6
Terminal effector memory CD4 T-cell nTPM: 161.8
Samples: 2
Max nTPM: 323.5
Min nTPM: 0.0
RHH5243_R3615
0.0
RHH5272_R3644
323.5
Terminal effector memory CD8 T-cell nTPM: 58.2
Samples: 4
Max nTPM: 92.7
Min nTPM: 35.0
RHH5232_R3604
92.7
RHH5204_R3575
55.2
RHH5261_R3633
49.7
RHH5296_R3662
35.0
Vd2 gdTCR nTPM: 174.4
Samples: 4
Max nTPM: 239.1
Min nTPM: 23.8
RHH5234_R3606
215.2
RHH5206_R3577
23.8
RHH5263_R3635
239.1
RHH5298_R3664
219.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
