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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
213.3
nTPM
Monaco:
206.2
nTPM
Schmiedel:
180.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
213.3
HPA sample
nTPM
gdT-cell nTPM: 14.2
Samples: 6
Max nTPM: 21.6
Min nTPM: 5.3
P10809_1007
21.6
P10809_1022
17.7
P10809_1041
5.3
P10809_1060
15.5
P10809_1077
14.0
P10809_1098
11.0
MAIT T-cell nTPM: 213.3
Samples: 6
Max nTPM: 967.3
Min nTPM: 26.9
P10809_1006
967.3
P10809_1024
80.4
P10809_1043
62.1
P10809_1062
36.9
P10809_1083
106.3
P10809_1097
26.9
Memory CD4 T-cell nTPM: 142.3
Samples: 6
Max nTPM: 216.6
Min nTPM: 105.6
P10809_1014
111.6
P10809_1026
116.1
P10809_1045
105.6
P10809_1064
167.3
P10809_1086
216.6
P10809_1113
136.5
Memory CD8 T-cell nTPM: 106.1
Samples: 5
Max nTPM: 248.3
Min nTPM: 51.4
P10809_1012
248.3
P10809_1027
67.7
P10809_1046
64.0
P10809_1065
51.4
P10809_1111
99.3
Naive CD4 T-cell nTPM: 107.9
Samples: 6
Max nTPM: 156.2
Min nTPM: 80.7
P10809_1015
82.7
P10809_1030
156.2
P10809_1049
129.6
P10809_1068
91.7
P10809_1085
80.7
P10809_1112
106.6
Naive CD8 T-cell nTPM: 88.1
Samples: 6
Max nTPM: 147.2
Min nTPM: 29.2
P10809_1016
54.5
P10809_1031
147.2
P10809_1050
84.7
P10809_1069
29.2
P10809_1087
113.8
P10809_1110
99.3
T-reg nTPM: 157.5
Samples: 6
Max nTPM: 179.8
Min nTPM: 141.2
P10809_1018
142.6
P10809_1037
179.8
P10809_1056
150.9
P10809_1075
141.2
P10809_1094
159.2
P10809_1106
171.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
206.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 143.5
Samples: 4
Max nTPM: 235.7
Min nTPM: 0.0
RHH5202_R3573
235.7
RHH5230_R3602
197.6
RHH5259_R3631
0.0
RHH5288_R3660
140.7
Effector memory CD8 T-cell nTPM: 115.3
Samples: 4
Max nTPM: 257.0
Min nTPM: 39.8
RHH5203_R3574
98.5
RHH5231_R3603
257.0
RHH5260_R3632
65.8
RHH5289_R3661
39.8
MAIT T-cell nTPM: 129.6
Samples: 4
Max nTPM: 249.6
Min nTPM: 47.1
RHH5233_R3605
47.1
RHH5205_R3576
57.7
RHH5262_R3634
164.0
RHH5297_R3663
249.6
Memory CD4 T-cell TFH nTPM: 170.2
Samples: 4
Max nTPM: 327.7
Min nTPM: 52.8
RHH5300_R3666
327.7
RHH5236_R3608
126.9
RHH5265_R3637
173.2
RHH5208_R3579
52.8
Memory CD4 T-cell Th1 nTPM: 133.3
Samples: 4
Max nTPM: 162.8
Min nTPM: 113.4
RHH5210_R3581
113.4
RHH5302_R3668
130.7
RHH5238_R3610
162.8
RHH5267_R3639
126.4
Memory CD4 T-cell Th1/Th17 nTPM: 154.3
Samples: 4
Max nTPM: 238.9
Min nTPM: 98.5
RHH5303_R3669
152.8
RHH5211_R3582
98.5
RHH5239_R3611
238.9
RHH5268_R3640
127.0
Memory CD4 T-cell Th17 nTPM: 175.0
Samples: 4
Max nTPM: 294.7
Min nTPM: 71.5
RHH5304_R3670
120.7
RHH5212_R3583
213.0
RHH5240_R3612
71.5
RHH5269_R3641
294.7
Memory CD4 T-cell Th2 nTPM: 155.0
Samples: 4
Max nTPM: 198.3
Min nTPM: 99.2
RHH5305_R3671
145.5
RHH5213_R3584
177.1
RHH5241_R3613
99.2
RHH5270_R3642
198.3
Naive CD4 T-cell nTPM: 109.4
Samples: 4
Max nTPM: 177.5
Min nTPM: 42.3
RHH5306_R3672
42.3
RHH5214_R3585
116.3
RHH5242_R3614
177.5
RHH5271_R3643
101.6
Naive CD8 T-cell nTPM: 108.5
Samples: 4
Max nTPM: 162.8
Min nTPM: 42.8
RHH5201_R3572
77.1
RHH5229_R3601
42.8
RHH5258_R3630
151.4
RHH5287_R3659
162.8
Non-Vd2 gdTCR nTPM: 24.1
Samples: 4
Max nTPM: 77.4
Min nTPM: 0.0
RHH5235_R3607
77.4
RHH5264_R3636
0.0
RHH5207_R3578
19.0
RHH5299_R3665
0.0
T-reg nTPM: 206.3
Samples: 4
Max nTPM: 328.9
Min nTPM: 83.4
RHH5301_R3667
83.4
RHH5237_R3609
328.9
RHH5266_R3638
238.0
RHH5209_R3580
174.7
Terminal effector memory CD4 T-cell nTPM: 89.0
Samples: 2
Max nTPM: 177.9
Min nTPM: 0.0
RHH5243_R3615
0.0
RHH5272_R3644
177.9
Terminal effector memory CD8 T-cell nTPM: 94.7
Samples: 4
Max nTPM: 148.3
Min nTPM: 18.4
RHH5232_R3604
148.3
RHH5204_R3575
18.4
RHH5261_R3633
124.3
RHH5296_R3662
87.7
Vd2 gdTCR nTPM: 54.7
Samples: 4
Max nTPM: 84.4
Min nTPM: 23.8
RHH5234_R3606
40.3
RHH5206_R3577
23.8
RHH5263_R3635
70.3
RHH5298_R3664
84.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
