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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
109.0
nTPM
Monaco:
465.9
nTPM
Schmiedel:
66.5
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
109.0
HPA sample
nTPM
gdT-cell nTPM: 1.5
Samples: 6
Max nTPM: 3.6
Min nTPM: 0.0
P10809_1007
0.0
P10809_1022
3.6
P10809_1041
3.1
P10809_1060
0.6
P10809_1077
0.0
P10809_1098
1.4
MAIT T-cell nTPM: 24.9
Samples: 6
Max nTPM: 61.0
Min nTPM: 4.7
P10809_1006
61.0
P10809_1024
9.0
P10809_1043
8.8
P10809_1062
16.7
P10809_1083
49.2
P10809_1097
4.7
Memory CD4 T-cell nTPM: 65.9
Samples: 6
Max nTPM: 104.8
Min nTPM: 43.2
P10809_1014
104.8
P10809_1026
56.1
P10809_1045
52.3
P10809_1064
43.2
P10809_1086
63.9
P10809_1113
74.9
Memory CD8 T-cell nTPM: 49.6
Samples: 5
Max nTPM: 94.8
Min nTPM: 12.5
P10809_1012
94.8
P10809_1027
62.8
P10809_1046
12.5
P10809_1065
18.6
P10809_1111
59.4
Naive CD4 T-cell nTPM: 68.0
Samples: 6
Max nTPM: 102.9
Min nTPM: 54.4
P10809_1015
102.9
P10809_1030
54.4
P10809_1049
68.8
P10809_1068
61.1
P10809_1085
57.1
P10809_1112
63.4
Naive CD8 T-cell nTPM: 41.9
Samples: 6
Max nTPM: 71.6
Min nTPM: 5.8
P10809_1016
66.6
P10809_1031
5.8
P10809_1050
47.5
P10809_1069
48.1
P10809_1087
12.0
P10809_1110
71.6
T-reg nTPM: 109.0
Samples: 6
Max nTPM: 143.5
Min nTPM: 75.0
P10809_1018
137.4
P10809_1037
87.6
P10809_1056
123.3
P10809_1075
143.5
P10809_1094
87.2
P10809_1106
75.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
465.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 331.2
Samples: 4
Max nTPM: 414.0
Min nTPM: 147.1
RHH5202_R3573
147.1
RHH5230_R3602
377.1
RHH5259_R3631
414.0
RHH5288_R3660
386.7
Effector memory CD8 T-cell nTPM: 269.2
Samples: 4
Max nTPM: 550.8
Min nTPM: 92.5
RHH5203_R3574
92.5
RHH5231_R3603
281.0
RHH5260_R3632
152.3
RHH5289_R3661
550.8
MAIT T-cell nTPM: 218.6
Samples: 4
Max nTPM: 345.1
Min nTPM: 157.4
RHH5233_R3605
178.2
RHH5205_R3576
157.4
RHH5262_R3634
345.1
RHH5297_R3663
193.6
Memory CD4 T-cell TFH nTPM: 377.6
Samples: 4
Max nTPM: 487.2
Min nTPM: 296.7
RHH5300_R3666
296.7
RHH5236_R3608
390.8
RHH5265_R3637
487.2
RHH5208_R3579
335.7
Memory CD4 T-cell Th1 nTPM: 354.2
Samples: 4
Max nTPM: 600.6
Min nTPM: 178.3
RHH5210_R3581
178.3
RHH5302_R3668
208.1
RHH5238_R3610
600.6
RHH5267_R3639
429.7
Memory CD4 T-cell Th1/Th17 nTPM: 402.1
Samples: 4
Max nTPM: 475.4
Min nTPM: 333.8
RHH5303_R3669
377.1
RHH5211_R3582
333.8
RHH5239_R3611
475.4
RHH5268_R3640
422.0
Memory CD4 T-cell Th17 nTPM: 430.7
Samples: 4
Max nTPM: 489.9
Min nTPM: 361.5
RHH5304_R3670
443.6
RHH5212_R3583
361.5
RHH5240_R3612
489.9
RHH5269_R3641
427.8
Memory CD4 T-cell Th2 nTPM: 385.4
Samples: 4
Max nTPM: 520.8
Min nTPM: 287.7
RHH5305_R3671
520.8
RHH5213_R3584
317.2
RHH5241_R3613
416.0
RHH5270_R3642
287.7
Naive CD4 T-cell nTPM: 456.6
Samples: 4
Max nTPM: 680.9
Min nTPM: 215.9
RHH5306_R3672
394.1
RHH5214_R3585
215.9
RHH5242_R3614
680.9
RHH5271_R3643
535.3
Naive CD8 T-cell nTPM: 399.1
Samples: 4
Max nTPM: 549.5
Min nTPM: 247.5
RHH5201_R3572
247.5
RHH5229_R3601
549.5
RHH5258_R3630
449.5
RHH5287_R3659
349.8
Non-Vd2 gdTCR nTPM: 74.7
Samples: 4
Max nTPM: 168.4
Min nTPM: 0.0
RHH5235_R3607
168.4
RHH5264_R3636
0.0
RHH5207_R3578
68.0
RHH5299_R3665
62.3
T-reg nTPM: 466.0
Samples: 4
Max nTPM: 744.0
Min nTPM: 188.8
RHH5301_R3667
744.0
RHH5237_R3609
188.8
RHH5266_R3638
681.6
RHH5209_R3580
249.4
Terminal effector memory CD4 T-cell nTPM: 187.1
Samples: 2
Max nTPM: 374.2
Min nTPM: 0.0
RHH5243_R3615
0.0
RHH5272_R3644
374.2
Terminal effector memory CD8 T-cell nTPM: 272.2
Samples: 4
Max nTPM: 393.9
Min nTPM: 157.4
RHH5232_R3604
393.9
RHH5204_R3575
211.1
RHH5261_R3633
157.4
RHH5296_R3662
326.2
Vd2 gdTCR nTPM: 129.8
Samples: 4
Max nTPM: 281.8
Min nTPM: 27.2
RHH5234_R3606
47.7
RHH5206_R3577
27.2
RHH5263_R3635
162.6
RHH5298_R3664
281.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
