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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
298.3
nTPM
Monaco:
196.4
nTPM
Schmiedel:
118.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
298.3
HPA sample
nTPM
gdT-cell nTPM: 2.7
Samples: 6
Max nTPM: 5.6
Min nTPM: 0.0
P10809_1007
1.8
P10809_1022
1.9
P10809_1041
0.0
P10809_1060
4.9
P10809_1077
1.9
P10809_1098
5.6
MAIT T-cell nTPM: 32.9
Samples: 6
Max nTPM: 46.0
Min nTPM: 18.9
P10809_1006
43.4
P10809_1024
39.6
P10809_1043
27.9
P10809_1062
46.0
P10809_1083
18.9
P10809_1097
21.3
Memory CD4 T-cell nTPM: 137.7
Samples: 6
Max nTPM: 177.2
Min nTPM: 84.5
P10809_1014
177.2
P10809_1026
137.2
P10809_1045
135.1
P10809_1064
84.5
P10809_1086
128.3
P10809_1113
164.1
Memory CD8 T-cell nTPM: 150.7
Samples: 5
Max nTPM: 269.5
Min nTPM: 103.0
P10809_1012
163.6
P10809_1027
108.6
P10809_1046
269.5
P10809_1065
103.0
P10809_1111
109.0
Naive CD4 T-cell nTPM: 118.9
Samples: 6
Max nTPM: 139.9
Min nTPM: 82.4
P10809_1015
139.9
P10809_1030
131.3
P10809_1049
138.4
P10809_1068
82.4
P10809_1085
122.9
P10809_1112
98.3
Naive CD8 T-cell nTPM: 188.3
Samples: 6
Max nTPM: 719.3
Min nTPM: 35.3
P10809_1016
65.7
P10809_1031
146.2
P10809_1050
719.3
P10809_1069
76.6
P10809_1087
35.3
P10809_1110
86.8
T-reg nTPM: 298.3
Samples: 6
Max nTPM: 367.3
Min nTPM: 221.8
P10809_1018
274.8
P10809_1037
348.1
P10809_1056
221.8
P10809_1075
249.8
P10809_1094
367.3
P10809_1106
328.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
196.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 121.2
Samples: 4
Max nTPM: 165.5
Min nTPM: 53.2
RHH5202_R3573
102.0
RHH5230_R3602
164.2
RHH5259_R3631
53.2
RHH5288_R3660
165.5
Effector memory CD8 T-cell nTPM: 59.0
Samples: 4
Max nTPM: 89.0
Min nTPM: 36.2
RHH5203_R3574
36.2
RHH5231_R3603
89.0
RHH5260_R3632
73.4
RHH5289_R3661
37.5
MAIT T-cell nTPM: 62.6
Samples: 4
Max nTPM: 97.5
Min nTPM: 29.6
RHH5233_R3605
87.1
RHH5205_R3576
36.3
RHH5262_R3634
97.5
RHH5297_R3663
29.6
Memory CD4 T-cell TFH nTPM: 140.8
Samples: 4
Max nTPM: 148.2
Min nTPM: 134.9
RHH5300_R3666
139.8
RHH5236_R3608
134.9
RHH5265_R3637
140.1
RHH5208_R3579
148.2
Memory CD4 T-cell Th1 nTPM: 113.1
Samples: 4
Max nTPM: 151.9
Min nTPM: 53.2
RHH5210_R3581
53.2
RHH5302_R3668
108.8
RHH5238_R3610
151.9
RHH5267_R3639
138.4
Memory CD4 T-cell Th1/Th17 nTPM: 128.7
Samples: 4
Max nTPM: 195.1
Min nTPM: 85.2
RHH5303_R3669
85.2
RHH5211_R3582
91.9
RHH5239_R3611
142.7
RHH5268_R3640
195.1
Memory CD4 T-cell Th17 nTPM: 88.7
Samples: 4
Max nTPM: 103.2
Min nTPM: 70.4
RHH5304_R3670
86.2
RHH5212_R3583
70.4
RHH5240_R3612
94.8
RHH5269_R3641
103.2
Memory CD4 T-cell Th2 nTPM: 91.0
Samples: 4
Max nTPM: 146.0
Min nTPM: 61.5
RHH5305_R3671
68.2
RHH5213_R3584
88.2
RHH5241_R3613
146.0
RHH5270_R3642
61.5
Naive CD4 T-cell nTPM: 196.4
Samples: 4
Max nTPM: 460.6
Min nTPM: 78.0
RHH5306_R3672
79.2
RHH5214_R3585
78.0
RHH5242_R3614
460.6
RHH5271_R3643
167.7
Naive CD8 T-cell nTPM: 106.2
Samples: 4
Max nTPM: 210.7
Min nTPM: 40.1
RHH5201_R3572
109.5
RHH5229_R3601
40.1
RHH5258_R3630
64.4
RHH5287_R3659
210.7
Non-Vd2 gdTCR nTPM: 22.3
Samples: 4
Max nTPM: 71.3
Min nTPM: 0.0
RHH5235_R3607
71.3
RHH5264_R3636
0.0
RHH5207_R3578
17.8
RHH5299_R3665
0.0
T-reg nTPM: 166.2
Samples: 4
Max nTPM: 243.1
Min nTPM: 127.2
RHH5301_R3667
243.1
RHH5237_R3609
134.5
RHH5266_R3638
159.8
RHH5209_R3580
127.2
Terminal effector memory CD4 T-cell nTPM: 111.6
Samples: 2
Max nTPM: 200.7
Min nTPM: 22.5
RHH5243_R3615
22.5
RHH5272_R3644
200.7
Terminal effector memory CD8 T-cell nTPM: 46.0
Samples: 4
Max nTPM: 103.6
Min nTPM: 0.0
RHH5232_R3604
103.6
RHH5204_R3575
0.0
RHH5261_R3633
0.0
RHH5296_R3662
80.5
Vd2 gdTCR nTPM: 73.4
Samples: 4
Max nTPM: 103.7
Min nTPM: 45.8
RHH5234_R3606
49.2
RHH5206_R3577
45.8
RHH5263_R3635
103.7
RHH5298_R3664
95.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
