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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
87.6
nTPM
Monaco:
124.9
nTPM
Schmiedel:
124.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
87.6
HPA sample
nTPM
gdT-cell nTPM: 0.3
Samples: 6
Max nTPM: 1.0
Min nTPM: 0.0
P10809_1007
0.9
P10809_1022
0.0
P10809_1041
0.0
P10809_1060
1.0
P10809_1077
0.0
P10809_1098
0.0
MAIT T-cell nTPM: 27.0
Samples: 6
Max nTPM: 74.3
Min nTPM: 4.0
P10809_1006
14.2
P10809_1024
7.7
P10809_1043
19.7
P10809_1062
42.0
P10809_1083
74.3
P10809_1097
4.0
Memory CD4 T-cell nTPM: 44.3
Samples: 6
Max nTPM: 56.2
Min nTPM: 24.9
P10809_1014
43.7
P10809_1026
52.2
P10809_1045
56.2
P10809_1064
24.9
P10809_1086
37.0
P10809_1113
52.0
Memory CD8 T-cell nTPM: 28.7
Samples: 5
Max nTPM: 43.7
Min nTPM: 8.6
P10809_1012
38.3
P10809_1027
8.6
P10809_1046
28.5
P10809_1065
24.2
P10809_1111
43.7
Naive CD4 T-cell nTPM: 54.9
Samples: 6
Max nTPM: 66.3
Min nTPM: 35.8
P10809_1015
35.8
P10809_1030
60.2
P10809_1049
66.3
P10809_1068
56.1
P10809_1085
61.5
P10809_1112
49.7
Naive CD8 T-cell nTPM: 31.2
Samples: 6
Max nTPM: 46.0
Min nTPM: 12.9
P10809_1016
41.0
P10809_1031
26.0
P10809_1050
46.0
P10809_1069
29.8
P10809_1087
12.9
P10809_1110
31.7
T-reg nTPM: 87.6
Samples: 6
Max nTPM: 182.5
Min nTPM: 38.7
P10809_1018
74.7
P10809_1037
182.5
P10809_1056
43.5
P10809_1075
57.1
P10809_1094
38.7
P10809_1106
129.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
124.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 57.1
Samples: 4
Max nTPM: 70.3
Min nTPM: 28.2
RHH5202_R3573
64.2
RHH5230_R3602
65.8
RHH5259_R3631
28.2
RHH5288_R3660
70.3
Effector memory CD8 T-cell nTPM: 78.0
Samples: 4
Max nTPM: 252.3
Min nTPM: 13.5
RHH5203_R3574
19.7
RHH5231_R3603
13.5
RHH5260_R3632
26.3
RHH5289_R3661
252.3
MAIT T-cell nTPM: 118.5
Samples: 4
Max nTPM: 298.2
Min nTPM: 19.2
RHH5233_R3605
94.2
RHH5205_R3576
19.2
RHH5262_R3634
298.2
RHH5297_R3663
62.4
Memory CD4 T-cell TFH nTPM: 124.9
Samples: 4
Max nTPM: 185.6
Min nTPM: 63.4
RHH5300_R3666
127.4
RHH5236_R3608
63.4
RHH5265_R3637
185.6
RHH5208_R3579
123.2
Memory CD4 T-cell Th1 nTPM: 122.6
Samples: 4
Max nTPM: 228.8
Min nTPM: 28.3
RHH5210_R3581
28.3
RHH5302_R3668
228.8
RHH5238_R3610
61.0
RHH5267_R3639
172.4
Memory CD4 T-cell Th1/Th17 nTPM: 108.1
Samples: 4
Max nTPM: 254.0
Min nTPM: 0.0
RHH5303_R3669
45.8
RHH5211_R3582
0.0
RHH5239_R3611
132.7
RHH5268_R3640
254.0
Memory CD4 T-cell Th17 nTPM: 89.0
Samples: 4
Max nTPM: 150.9
Min nTPM: 10.6
RHH5304_R3670
150.9
RHH5212_R3583
10.6
RHH5240_R3612
71.5
RHH5269_R3641
122.8
Memory CD4 T-cell Th2 nTPM: 93.3
Samples: 4
Max nTPM: 184.3
Min nTPM: 54.5
RHH5305_R3671
54.5
RHH5213_R3584
68.1
RHH5241_R3613
184.3
RHH5270_R3642
66.1
Naive CD4 T-cell nTPM: 100.4
Samples: 4
Max nTPM: 190.5
Min nTPM: 25.3
RHH5306_R3672
190.5
RHH5214_R3585
33.2
RHH5242_R3614
25.3
RHH5271_R3643
152.4
Naive CD8 T-cell nTPM: 69.2
Samples: 4
Max nTPM: 123.8
Min nTPM: 38.5
RHH5201_R3572
38.5
RHH5229_R3601
64.2
RHH5258_R3630
123.8
RHH5287_R3659
50.1
Non-Vd2 gdTCR nTPM: 7.5
Samples: 4
Max nTPM: 19.0
Min nTPM: 0.0
RHH5235_R3607
11.0
RHH5264_R3636
0.0
RHH5207_R3578
19.0
RHH5299_R3665
0.0
T-reg nTPM: 101.8
Samples: 4
Max nTPM: 132.2
Min nTPM: 62.3
RHH5301_R3667
125.1
RHH5237_R3609
87.7
RHH5266_R3638
132.2
RHH5209_R3580
62.3
Terminal effector memory CD4 T-cell nTPM: 98.7
Samples: 2
Max nTPM: 161.7
Min nTPM: 35.7
RHH5243_R3615
35.7
RHH5272_R3644
161.7
Terminal effector memory CD8 T-cell nTPM: 31.4
Samples: 4
Max nTPM: 70.1
Min nTPM: 0.0
RHH5232_R3604
55.6
RHH5204_R3575
0.0
RHH5261_R3633
0.0
RHH5296_R3662
70.1
Vd2 gdTCR nTPM: 23.7
Samples: 4
Max nTPM: 67.5
Min nTPM: 0.0
RHH5234_R3606
13.4
RHH5206_R3577
0.0
RHH5263_R3635
14.0
RHH5298_R3664
67.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
