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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
265.1
nTPM
Monaco:
224.4
nTPM
Schmiedel:
143.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
265.1
HPA sample
nTPM
gdT-cell nTPM: 5.4
Samples: 6
Max nTPM: 13.8
Min nTPM: 0.8
P10809_1007
0.8
P10809_1022
3.7
P10809_1041
0.8
P10809_1060
7.7
P10809_1077
13.8
P10809_1098
5.5
MAIT T-cell nTPM: 137.7
Samples: 6
Max nTPM: 241.0
Min nTPM: 58.2
P10809_1006
139.3
P10809_1024
241.0
P10809_1043
92.3
P10809_1062
138.6
P10809_1083
156.6
P10809_1097
58.2
Memory CD4 T-cell nTPM: 135.4
Samples: 6
Max nTPM: 160.7
Min nTPM: 108.7
P10809_1014
139.7
P10809_1026
157.4
P10809_1045
122.4
P10809_1064
108.7
P10809_1086
160.7
P10809_1113
123.6
Memory CD8 T-cell nTPM: 143.2
Samples: 5
Max nTPM: 204.8
Min nTPM: 81.2
P10809_1012
159.4
P10809_1027
107.4
P10809_1046
81.2
P10809_1065
204.8
P10809_1111
163.2
Naive CD4 T-cell nTPM: 138.4
Samples: 6
Max nTPM: 162.9
Min nTPM: 112.0
P10809_1015
136.7
P10809_1030
121.4
P10809_1049
162.9
P10809_1068
134.6
P10809_1085
162.7
P10809_1112
112.0
Naive CD8 T-cell nTPM: 76.5
Samples: 6
Max nTPM: 114.9
Min nTPM: 38.6
P10809_1016
94.8
P10809_1031
114.9
P10809_1050
38.6
P10809_1069
78.5
P10809_1087
51.2
P10809_1110
81.2
T-reg nTPM: 265.2
Samples: 6
Max nTPM: 389.1
Min nTPM: 153.8
P10809_1018
153.8
P10809_1037
164.8
P10809_1056
389.1
P10809_1075
321.2
P10809_1094
325.2
P10809_1106
236.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
224.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 113.1
Samples: 4
Max nTPM: 133.6
Min nTPM: 96.7
RHH5202_R3573
119.3
RHH5230_R3602
133.6
RHH5259_R3631
102.8
RHH5288_R3660
96.7
Effector memory CD8 T-cell nTPM: 124.6
Samples: 4
Max nTPM: 195.0
Min nTPM: 82.7
RHH5203_R3574
195.0
RHH5231_R3603
123.3
RHH5260_R3632
82.7
RHH5289_R3661
97.3
MAIT T-cell nTPM: 144.0
Samples: 4
Max nTPM: 183.9
Min nTPM: 69.8
RHH5233_R3605
183.9
RHH5205_R3576
69.8
RHH5262_R3634
150.0
RHH5297_R3663
172.3
Memory CD4 T-cell TFH nTPM: 144.5
Samples: 4
Max nTPM: 204.1
Min nTPM: 81.3
RHH5300_R3666
204.1
RHH5236_R3608
81.3
RHH5265_R3637
180.9
RHH5208_R3579
111.6
Memory CD4 T-cell Th1 nTPM: 170.3
Samples: 4
Max nTPM: 214.7
Min nTPM: 116.3
RHH5210_R3581
116.3
RHH5302_R3668
193.8
RHH5238_R3610
156.4
RHH5267_R3639
214.7
Memory CD4 T-cell Th1/Th17 nTPM: 181.5
Samples: 4
Max nTPM: 299.7
Min nTPM: 88.7
RHH5303_R3669
165.7
RHH5211_R3582
88.7
RHH5239_R3611
171.8
RHH5268_R3640
299.7
Memory CD4 T-cell Th17 nTPM: 140.8
Samples: 4
Max nTPM: 212.5
Min nTPM: 106.5
RHH5304_R3670
111.6
RHH5212_R3583
106.5
RHH5240_R3612
132.5
RHH5269_R3641
212.5
Memory CD4 T-cell Th2 nTPM: 110.0
Samples: 4
Max nTPM: 132.8
Min nTPM: 73.0
RHH5305_R3671
132.8
RHH5213_R3584
73.0
RHH5241_R3613
128.1
RHH5270_R3642
106.0
Naive CD4 T-cell nTPM: 129.7
Samples: 4
Max nTPM: 180.6
Min nTPM: 81.7
RHH5306_R3672
153.7
RHH5214_R3585
180.6
RHH5242_R3614
102.8
RHH5271_R3643
81.7
Naive CD8 T-cell nTPM: 129.0
Samples: 4
Max nTPM: 188.5
Min nTPM: 71.6
RHH5201_R3572
71.6
RHH5229_R3601
97.5
RHH5258_R3630
188.5
RHH5287_R3659
158.3
Non-Vd2 gdTCR nTPM: 36.0
Samples: 4
Max nTPM: 84.3
Min nTPM: 9.8
RHH5235_R3607
9.8
RHH5264_R3636
15.8
RHH5207_R3578
33.9
RHH5299_R3665
84.3
T-reg nTPM: 224.4
Samples: 4
Max nTPM: 309.0
Min nTPM: 100.0
RHH5301_R3667
210.8
RHH5237_R3609
277.6
RHH5266_R3638
309.0
RHH5209_R3580
100.0
Terminal effector memory CD4 T-cell nTPM: 49.8
Samples: 2
Max nTPM: 88.6
Min nTPM: 10.9
RHH5243_R3615
10.9
RHH5272_R3644
88.6
Terminal effector memory CD8 T-cell nTPM: 57.6
Samples: 4
Max nTPM: 82.9
Min nTPM: 33.4
RHH5232_R3604
67.2
RHH5204_R3575
82.9
RHH5261_R3633
33.4
RHH5296_R3662
46.9
Vd2 gdTCR nTPM: 30.0
Samples: 4
Max nTPM: 46.8
Min nTPM: 0.0
RHH5234_R3606
35.7
RHH5206_R3577
0.0
RHH5263_R3635
37.4
RHH5298_R3664
46.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
