HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:28.0 nTPM
HPA Brain:5.0 nTPM
GTEx:28.0 nTPM
FANTOM5:2.4 Scaled Tags Per Million
Pig:15.0 nTPM
Mouse:29.3 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042462
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 5.0
Sample id Sample description nTPM
Hippocampus
nTPM: 3.9
2529 Female, age 94, left hemisphere 5.1
2621 Female, age 67, right hemisphere 4.6
1911 Female, age 85, right hemisphere 3.9
1898 Male, age 80, left hemisphere 3.5
1855 Male, age 76, left hemisphere 3.2
2148 Female, age 91, left hemisphere 3.1
Dentate gyrus
nTPM: 4.9
2010 Male, age 76, both hemispheres 8.5
2530 Female, age 94, left hemisphere 6.2
2531 Female, age 67, both hemispheres 4.2
2528 Male, age 74, both hemispheres 3.9
2246 Female, age 85, both hemispheres 3.3
1927 Female, age 91, both hemispheres 3.1
Entorhinal gyrus
nTPM: 2.9
1787 Male, age 76, left hemisphere 3.7
2613 Female, age 94, left hemisphere 3.3
2117 Female, age 91, right hemisphere 2.8
2686 Male, age 75, right hemisphere 2.6
1938 Female, age 85, left hemisphere 2.5
2764 Male, age 80, right hemisphere 2.5
Hippocampus, CA1
nTPM: 3.9
2082 Female, age 91, right hemisphere 7.3
1873 Female, age 85, both hemispheres 4.7
2527 Male, age 74, both hemispheres 2.8
2045 Male, age 76, both hemispheres 2.5
2749 Male, age 80, left hemisphere 2.1
Hippocampus, CA2
nTPM: 5.0
1940 Female, age 85, left hemisphere 8.4
2249 Male, age 74, both hemispheres 7.4
2113 Female, age 91, right hemisphere 4.1
2437 Female, age 94, left hemisphere 3.9
1892 Male, age 76, both hemispheres 3.6
1963 Male, age 80, left hemisphere 2.8
Hippocampus, CA3
nTPM: 3.4
2861 Female, age 67, both hemispheres 4.9
2436 Male, age 74, both hemispheres 4.1
1891 Female, age 85, both hemispheres 3.9
1867 Male, age 76, both hemispheres 3.7
2620 Female, age 94, left hemisphere 2.7
2137 Male, age 80, left hemisphere 1.3
Parahippocampal cortex
nTPM: 2.5
2018 Male, age 76, both hemispheres 4.2
2245 Female, age 91, both hemispheres 3.7
2250 Female, age 67, right hemisphere 3.6
2622 Female, age 67, right hemisphere 2.5
1933 Female, age 85, both hemispheres 2.2
2692 Male, age 74, both hemispheres 2.2
1990 Female, age 91, right hemisphere 1.9
1850 Male, age 80, both hemispheres 1.7
2532 Female, age 72, left hemisphere 1.7
2693 Female, age 94, both hemispheres 1.6
Perirhinal gyrus
nTPM: 2.3
2521 Female, age 94, right hemisphere 3.1
1794 Male, age 80, right hemisphere 2.6
2848 Male, age 76, right hemisphere 2.5
1841 Female, age 85, right hemisphere 1.9
1847 Female, age 91, left hemisphere 1.5
Subiculum
nTPM: 3.9
2042 Male, age 76, both hemispheres 7.8
2438 Female, age 94, left hemisphere 3.8
1901 Male, age 80, both hemispheres 3.1
2619 Male, age 74, both hemispheres 3.0
1977 Female, age 85, both hemispheres 2.8
2729 Female, age 91, right hemisphere 2.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.0
Samples: 197

Max nTPM: 117.3
Min nTPM: 1.8
Std nTPM: 21.0
Median nTPM: 22.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 117.3
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 108.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 104.0
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 103.0
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 102.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 100.2
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 84.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 80.7
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 80.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 75.6
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 72.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 2.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 2.4
FF:10169-103B7 60 years, female 3.1
FF:10153-102I9 76 years, female 1.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.0
Pig sample Sample description nTPM
Subiculum
nTPM: 9.7
Samples: 4

Max nTPM: 13.8
Min nTPM: 6.7
Sample A Female 6.7
Sample B Female 8.5
Sample C Male 9.9
Sample D Male 13.8
Dorsal hippocampus
nTPM: 14.4
Samples: 4

Max nTPM: 21.9
Min nTPM: 5.8
Sample A Female 18.8
Sample B Female 11.0
Sample C Male 21.9
Sample D Male 5.8
Entorhinal cortex
nTPM: 6.4
Samples: 4

Max nTPM: 7.4
Min nTPM: 5.4
Sample A Female 6.7
Sample B Female 6.2
Sample C Male 7.4
Sample D Male 5.4
Ventral hippocampus
nTPM: 15.0
Samples: 4

Max nTPM: 20.9
Min nTPM: 7.3
Sample A Female 16.6
Sample B Female 7.3
Sample C Male 20.9
Sample D Male 15.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.3
Samples: 4

Max nTPM: 39.9
Min nTPM: 18.0
Sample A Male 30.4
Sample B Male 18.0
Sample C Female 39.9
Sample D Female 28.8
Hippocampal formation
nTPM: 26.9
Samples: 4

Max nTPM: 32.3
Min nTPM: 23.6
Sample A Male 26.1
Sample B Male 23.6
Sample C Female 25.6
Sample D Female 32.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68632643 Antisense, RP_050125_01_H12, Mouse strain C57BL/6J (56 days, male) 0.1

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