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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
68.2
nTPM
Monaco:
98.8
nTPM
Schmiedel:
94.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.2
HPA sample
nTPM
gdT-cell nTPM: 43.8
Samples: 6
Max nTPM: 66.6
Min nTPM: 18.6
P10809_1007
46.7
P10809_1022
37.1
P10809_1041
56.5
P10809_1060
18.6
P10809_1077
37.0
P10809_1098
66.6
MAIT T-cell nTPM: 51.1
Samples: 6
Max nTPM: 72.9
Min nTPM: 26.2
P10809_1006
64.5
P10809_1024
26.2
P10809_1043
64.7
P10809_1062
36.7
P10809_1083
41.5
P10809_1097
72.9
Memory CD4 T-cell nTPM: 47.5
Samples: 6
Max nTPM: 69.4
Min nTPM: 25.4
P10809_1014
48.1
P10809_1026
69.4
P10809_1045
62.8
P10809_1064
52.7
P10809_1086
25.4
P10809_1113
26.7
Memory CD8 T-cell nTPM: 54.1
Samples: 5
Max nTPM: 66.5
Min nTPM: 33.4
P10809_1012
53.9
P10809_1027
33.4
P10809_1046
64.0
P10809_1065
52.8
P10809_1111
66.5
Naive CD4 T-cell nTPM: 68.2
Samples: 6
Max nTPM: 99.3
Min nTPM: 56.6
P10809_1015
58.3
P10809_1030
68.2
P10809_1049
99.3
P10809_1068
67.1
P10809_1085
59.6
P10809_1112
56.6
Naive CD8 T-cell nTPM: 56.2
Samples: 6
Max nTPM: 70.1
Min nTPM: 18.4
P10809_1016
48.8
P10809_1031
63.0
P10809_1050
67.7
P10809_1069
70.1
P10809_1087
18.4
P10809_1110
69.0
T-reg nTPM: 34.0
Samples: 6
Max nTPM: 74.9
Min nTPM: 9.9
P10809_1018
24.1
P10809_1037
27.5
P10809_1056
74.9
P10809_1075
30.4
P10809_1094
9.9
P10809_1106
37.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
98.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 57.8
Samples: 4
Max nTPM: 85.9
Min nTPM: 20.1
RHH5202_R3573
20.1
RHH5230_R3602
85.9
RHH5259_R3631
75.7
RHH5288_R3660
49.5
Effector memory CD8 T-cell nTPM: 52.5
Samples: 4
Max nTPM: 74.3
Min nTPM: 25.1
RHH5203_R3574
40.7
RHH5231_R3603
69.8
RHH5260_R3632
74.3
RHH5289_R3661
25.1
MAIT T-cell nTPM: 63.1
Samples: 4
Max nTPM: 106.0
Min nTPM: 31.3
RHH5233_R3605
31.3
RHH5205_R3576
52.6
RHH5262_R3634
106.0
RHH5297_R3663
62.4
Memory CD4 T-cell TFH nTPM: 62.8
Samples: 4
Max nTPM: 89.3
Min nTPM: 14.1
RHH5300_R3666
89.3
RHH5236_R3608
79.8
RHH5265_R3637
68.0
RHH5208_R3579
14.1
Memory CD4 T-cell Th1 nTPM: 53.8
Samples: 4
Max nTPM: 84.8
Min nTPM: 42.1
RHH5210_R3581
44.1
RHH5302_R3668
44.0
RHH5238_R3610
42.1
RHH5267_R3639
84.8
Memory CD4 T-cell Th1/Th17 nTPM: 49.6
Samples: 4
Max nTPM: 71.8
Min nTPM: 28.1
RHH5303_R3669
28.1
RHH5211_R3582
59.3
RHH5239_R3611
39.2
RHH5268_R3640
71.8
Memory CD4 T-cell Th17 nTPM: 49.4
Samples: 4
Max nTPM: 66.5
Min nTPM: 28.6
RHH5304_R3670
38.8
RHH5212_R3583
66.5
RHH5240_R3612
28.6
RHH5269_R3641
63.7
Memory CD4 T-cell Th2 nTPM: 65.7
Samples: 4
Max nTPM: 81.6
Min nTPM: 26.7
RHH5305_R3671
80.4
RHH5213_R3584
74.0
RHH5241_R3613
26.7
RHH5270_R3642
81.6
Naive CD4 T-cell nTPM: 98.8
Samples: 4
Max nTPM: 127.8
Min nTPM: 61.1
RHH5306_R3672
127.8
RHH5214_R3585
88.9
RHH5242_R3614
61.1
RHH5271_R3643
117.4
Naive CD8 T-cell nTPM: 66.2
Samples: 4
Max nTPM: 98.8
Min nTPM: 25.7
RHH5201_R3572
25.7
RHH5229_R3601
49.7
RHH5258_R3630
98.8
RHH5287_R3659
90.7
Non-Vd2 gdTCR nTPM: 42.3
Samples: 4
Max nTPM: 67.6
Min nTPM: 19.5
RHH5235_R3607
49.5
RHH5264_R3636
32.7
RHH5207_R3578
19.5
RHH5299_R3665
67.6
T-reg nTPM: 84.3
Samples: 4
Max nTPM: 93.2
Min nTPM: 71.6
RHH5301_R3667
92.8
RHH5237_R3609
71.6
RHH5266_R3638
93.2
RHH5209_R3580
79.5
Terminal effector memory CD4 T-cell nTPM: 48.3
Samples: 2
Max nTPM: 51.4
Min nTPM: 45.2
RHH5243_R3615
51.4
RHH5272_R3644
45.2
Terminal effector memory CD8 T-cell nTPM: 37.4
Samples: 4
Max nTPM: 62.4
Min nTPM: 20.2
RHH5232_R3604
33.7
RHH5204_R3575
33.4
RHH5261_R3633
62.4
RHH5296_R3662
20.2
Vd2 gdTCR nTPM: 65.8
Samples: 4
Max nTPM: 83.6
Min nTPM: 47.7
RHH5234_R3606
56.3
RHH5206_R3577
47.7
RHH5263_R3635
75.5
RHH5298_R3664
83.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
