HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:19.2 nTPM
HPA Brain:22.6 nTPM
GTEx:19.2 nTPM
FANTOM5:36.8 Scaled Tags Per Million
Pig:5.0 nTPM
Mouse:9.1 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA048651Antibody HPA049440
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.6
Sample id Sample description nTPM
Hippocampus
nTPM: 19.3
2148 Female, age 91, left hemisphere 21.0
1855 Male, age 76, left hemisphere 19.9
1911 Female, age 85, right hemisphere 19.7
2621 Female, age 67, right hemisphere 19.7
1898 Male, age 80, left hemisphere 19.0
2529 Female, age 94, left hemisphere 16.7
Dentate gyrus
nTPM: 21.5
2531 Female, age 67, both hemispheres 25.2
2528 Male, age 74, both hemispheres 23.7
2246 Female, age 85, both hemispheres 21.2
2530 Female, age 94, left hemisphere 20.8
2010 Male, age 76, both hemispheres 20.5
1927 Female, age 91, both hemispheres 17.5
Entorhinal gyrus
nTPM: 19.6
2764 Male, age 80, right hemisphere 23.9
1787 Male, age 76, left hemisphere 22.0
2613 Female, age 94, left hemisphere 21.6
2686 Male, age 75, right hemisphere 18.1
2117 Female, age 91, right hemisphere 16.3
1938 Female, age 85, left hemisphere 15.6
Hippocampus, CA1
nTPM: 22.6
2749 Male, age 80, left hemisphere 28.1
2045 Male, age 76, both hemispheres 22.1
1873 Female, age 85, both hemispheres 21.4
2527 Male, age 74, both hemispheres 21.4
2082 Female, age 91, right hemisphere 19.8
Hippocampus, CA2
nTPM: 20.4
1963 Male, age 80, left hemisphere 23.6
2437 Female, age 94, left hemisphere 21.4
1892 Male, age 76, both hemispheres 21.1
2113 Female, age 91, right hemisphere 19.2
1940 Female, age 85, left hemisphere 18.9
2249 Male, age 74, both hemispheres 18.1
Hippocampus, CA3
nTPM: 20.4
2137 Male, age 80, left hemisphere 24.1
2620 Female, age 94, left hemisphere 23.6
1867 Male, age 76, both hemispheres 22.1
1891 Female, age 85, both hemispheres 18.6
2436 Male, age 74, both hemispheres 17.7
2861 Female, age 67, both hemispheres 16.2
Parahippocampal cortex
nTPM: 20.3
2622 Female, age 67, right hemisphere 23.1
1990 Female, age 91, right hemisphere 22.8
2250 Female, age 67, right hemisphere 21.8
2018 Male, age 76, both hemispheres 21.0
2532 Female, age 72, left hemisphere 21.0
1933 Female, age 85, both hemispheres 20.9
2692 Male, age 74, both hemispheres 20.7
1850 Male, age 80, both hemispheres 20.1
2245 Female, age 91, both hemispheres 18.0
2693 Female, age 94, both hemispheres 13.9
Perirhinal gyrus
nTPM: 21.3
1794 Male, age 80, right hemisphere 23.0
1847 Female, age 91, left hemisphere 22.2
2521 Female, age 94, right hemisphere 21.7
2848 Male, age 76, right hemisphere 20.7
1841 Female, age 85, right hemisphere 18.7
Subiculum
nTPM: 20.2
1977 Female, age 85, both hemispheres 25.7
2729 Female, age 91, right hemisphere 20.0
2619 Male, age 74, both hemispheres 19.8
1901 Male, age 80, both hemispheres 19.1
2438 Female, age 94, left hemisphere 19.1
2042 Male, age 76, both hemispheres 17.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.2
Samples: 197

Max nTPM: 40.8
Min nTPM: 5.5
Std nTPM: 4.7
Median nTPM: 19.3
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 40.8
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 31.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 31.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 30.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 29.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 28.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 28.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 27.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 27.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 26.7
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 26.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.8
FF:10153-102I9 76 years, female 43.6
FF:10169-103B7 60 years, female 30.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.0
Pig sample Sample description nTPM
Subiculum
nTPM: 4.1
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.3
Sample A Female 4.9
Sample B Female 3.3
Sample C Male 4.5
Sample D Male 3.6
Dorsal hippocampus
nTPM: 5.0
Samples: 4

Max nTPM: 5.4
Min nTPM: 4.2
Sample A Female 5.4
Sample B Female 5.4
Sample C Male 4.2
Sample D Male 5.0
Entorhinal cortex
nTPM: 4.4
Samples: 4

Max nTPM: 5.1
Min nTPM: 3.7
Sample A Female 4.3
Sample B Female 5.1
Sample C Male 3.7
Sample D Male 4.6
Ventral hippocampus
nTPM: 5.0
Samples: 4

Max nTPM: 5.8
Min nTPM: 4.2
Sample A Female 4.2
Sample B Female 4.2
Sample C Male 5.6
Sample D Male 5.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.8
Samples: 4

Max nTPM: 8.6
Min nTPM: 6.8
Sample A Male 8.0
Sample B Male 8.6
Sample C Female 6.8
Sample D Female 7.7
Hippocampal formation
nTPM: 9.1
Samples: 4

Max nTPM: 10.7
Min nTPM: 8.0
Sample A Male 10.7
Sample B Male 8.0
Sample C Female 8.2
Sample D Female 9.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
68920821 Antisense, RP_050303_01_C08, Mouse strain C57BL/6J (56 days, male) 0.5

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