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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1563.6
nTPM
Monaco:
1044.2
nTPM
Schmiedel:
0.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1563.6
HPA sample
nTPM
gdT-cell nTPM: 1563.6
Samples: 6
Max nTPM: 1840.0
Min nTPM: 1211.1
P10809_1007
1648.9
P10809_1022
1697.5
P10809_1041
1840.0
P10809_1060
1211.1
P10809_1077
1410.4
P10809_1098
1573.6
MAIT T-cell nTPM: 1325.2
Samples: 6
Max nTPM: 1521.7
Min nTPM: 1052.5
P10809_1006
1314.9
P10809_1024
1052.5
P10809_1043
1514.6
P10809_1062
1329.7
P10809_1083
1217.5
P10809_1097
1521.7
Memory CD4 T-cell nTPM: 958.3
Samples: 6
Max nTPM: 1062.4
Min nTPM: 839.3
P10809_1014
926.2
P10809_1026
1062.4
P10809_1045
839.3
P10809_1064
1043.3
P10809_1086
880.1
P10809_1113
998.6
Memory CD8 T-cell nTPM: 1380.6
Samples: 5
Max nTPM: 1422.1
Min nTPM: 1338.0
P10809_1012
1410.3
P10809_1027
1388.9
P10809_1046
1422.1
P10809_1065
1338.0
P10809_1111
1343.6
Naive CD4 T-cell nTPM: 690.6
Samples: 6
Max nTPM: 775.5
Min nTPM: 579.4
P10809_1015
667.2
P10809_1030
579.4
P10809_1049
641.9
P10809_1068
707.2
P10809_1085
772.2
P10809_1112
775.5
Naive CD8 T-cell nTPM: 1087.2
Samples: 6
Max nTPM: 1251.9
Min nTPM: 963.2
P10809_1016
1096.4
P10809_1031
998.7
P10809_1050
1047.9
P10809_1069
1251.9
P10809_1087
1164.9
P10809_1110
963.2
T-reg nTPM: 1378.1
Samples: 6
Max nTPM: 1612.3
Min nTPM: 1035.4
P10809_1018
1495.3
P10809_1037
1035.4
P10809_1056
1612.3
P10809_1075
1178.7
P10809_1094
1608.6
P10809_1106
1338.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1044.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 507.8
Samples: 4
Max nTPM: 870.8
Min nTPM: 348.0
RHH5202_R3573
408.4
RHH5230_R3602
348.0
RHH5259_R3631
403.8
RHH5288_R3660
870.8
Effector memory CD8 T-cell nTPM: 497.4
Samples: 4
Max nTPM: 568.4
Min nTPM: 415.6
RHH5203_R3574
568.4
RHH5231_R3603
536.5
RHH5260_R3632
469.2
RHH5289_R3661
415.6
MAIT T-cell nTPM: 715.6
Samples: 4
Max nTPM: 1162.8
Min nTPM: 409.0
RHH5233_R3605
643.4
RHH5205_R3576
409.0
RHH5262_R3634
647.2
RHH5297_R3663
1162.8
Memory CD4 T-cell TFH nTPM: 538.9
Samples: 4
Max nTPM: 702.0
Min nTPM: 347.0
RHH5300_R3666
702.0
RHH5236_R3608
589.9
RHH5265_R3637
347.0
RHH5208_R3579
516.6
Memory CD4 T-cell Th1 nTPM: 578.9
Samples: 4
Max nTPM: 1070.4
Min nTPM: 395.6
RHH5210_R3581
395.6
RHH5302_R3668
1070.4
RHH5238_R3610
427.1
RHH5267_R3639
422.4
Memory CD4 T-cell Th1/Th17 nTPM: 526.4
Samples: 4
Max nTPM: 943.5
Min nTPM: 251.3
RHH5303_R3669
943.5
RHH5211_R3582
503.2
RHH5239_R3611
251.3
RHH5268_R3640
407.4
Memory CD4 T-cell Th17 nTPM: 388.8
Samples: 4
Max nTPM: 504.5
Min nTPM: 282.1
RHH5304_R3670
504.5
RHH5212_R3583
470.9
RHH5240_R3612
282.1
RHH5269_R3641
297.8
Memory CD4 T-cell Th2 nTPM: 448.6
Samples: 4
Max nTPM: 549.5
Min nTPM: 369.4
RHH5305_R3671
549.5
RHH5213_R3584
373.2
RHH5241_R3613
502.4
RHH5270_R3642
369.4
Naive CD4 T-cell nTPM: 405.8
Samples: 4
Max nTPM: 555.1
Min nTPM: 264.9
RHH5306_R3672
518.2
RHH5214_R3585
555.1
RHH5242_R3614
285.0
RHH5271_R3643
264.9
Naive CD8 T-cell nTPM: 329.2
Samples: 4
Max nTPM: 460.8
Min nTPM: 237.6
RHH5201_R3572
292.3
RHH5229_R3601
237.6
RHH5258_R3630
460.8
RHH5287_R3659
326.2
Non-Vd2 gdTCR nTPM: 873.2
Samples: 4
Max nTPM: 1661.5
Min nTPM: 407.8
RHH5235_R3607
407.8
RHH5264_R3636
887.5
RHH5207_R3578
536.0
RHH5299_R3665
1661.5
T-reg nTPM: 550.0
Samples: 4
Max nTPM: 938.3
Min nTPM: 340.5
RHH5301_R3667
938.3
RHH5237_R3609
554.5
RHH5266_R3638
340.5
RHH5209_R3580
366.8
Terminal effector memory CD4 T-cell nTPM: 506.5
Samples: 2
Max nTPM: 619.5
Min nTPM: 393.4
RHH5243_R3615
393.4
RHH5272_R3644
619.5
Terminal effector memory CD8 T-cell nTPM: 1044.2
Samples: 4
Max nTPM: 1663.3
Min nTPM: 557.3
RHH5232_R3604
729.2
RHH5204_R3575
1663.3
RHH5261_R3633
557.3
RHH5296_R3662
1226.8
Vd2 gdTCR nTPM: 970.4
Samples: 4
Max nTPM: 1499.8
Min nTPM: 448.3
RHH5234_R3606
607.3
RHH5206_R3577
1326.1
RHH5263_R3635
448.3
RHH5298_R3664
1499.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.