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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
352.7
nTPM
Monaco:
260.3
nTPM
Schmiedel:
2.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
352.7
HPA sample
nTPM
gdT-cell nTPM: 297.4
Samples: 6
Max nTPM: 368.2
Min nTPM: 209.7
P10809_1007
209.7
P10809_1022
368.2
P10809_1041
364.2
P10809_1060
221.1
P10809_1077
261.7
P10809_1098
359.6
MAIT T-cell nTPM: 352.8
Samples: 6
Max nTPM: 427.4
Min nTPM: 258.4
P10809_1006
258.4
P10809_1024
370.3
P10809_1043
427.4
P10809_1062
332.8
P10809_1083
332.9
P10809_1097
394.7
Memory CD4 T-cell nTPM: 193.5
Samples: 6
Max nTPM: 253.4
Min nTPM: 138.0
P10809_1014
138.0
P10809_1026
253.4
P10809_1045
216.8
P10809_1064
174.0
P10809_1086
206.3
P10809_1113
172.6
Memory CD8 T-cell nTPM: 293.8
Samples: 5
Max nTPM: 352.4
Min nTPM: 215.0
P10809_1012
215.0
P10809_1027
351.1
P10809_1046
352.4
P10809_1065
221.4
P10809_1111
329.2
Naive CD4 T-cell nTPM: 213.7
Samples: 6
Max nTPM: 316.7
Min nTPM: 111.8
P10809_1015
111.8
P10809_1030
219.5
P10809_1049
316.7
P10809_1068
181.1
P10809_1085
235.6
P10809_1112
217.5
Naive CD8 T-cell nTPM: 212.0
Samples: 6
Max nTPM: 250.4
Min nTPM: 141.1
P10809_1016
141.1
P10809_1031
223.1
P10809_1050
250.4
P10809_1069
186.7
P10809_1087
247.9
P10809_1110
222.7
T-reg nTPM: 171.9
Samples: 6
Max nTPM: 260.7
Min nTPM: 121.4
P10809_1018
149.3
P10809_1037
179.8
P10809_1056
260.7
P10809_1075
121.4
P10809_1094
194.8
P10809_1106
125.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
260.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 137.2
Samples: 4
Max nTPM: 187.6
Min nTPM: 95.0
RHH5202_R3573
155.2
RHH5230_R3602
110.9
RHH5259_R3631
95.0
RHH5288_R3660
187.6
Effector memory CD8 T-cell nTPM: 178.1
Samples: 4
Max nTPM: 229.6
Min nTPM: 128.1
RHH5203_R3574
229.6
RHH5231_R3603
192.6
RHH5260_R3632
128.1
RHH5289_R3661
162.2
MAIT T-cell nTPM: 260.3
Samples: 4
Max nTPM: 389.3
Min nTPM: 159.5
RHH5233_R3605
247.3
RHH5205_R3576
159.5
RHH5262_R3634
245.2
RHH5297_R3663
389.3
Memory CD4 T-cell TFH nTPM: 162.3
Samples: 4
Max nTPM: 208.5
Min nTPM: 136.4
RHH5300_R3666
208.5
RHH5236_R3608
157.9
RHH5265_R3637
136.4
RHH5208_R3579
146.5
Memory CD4 T-cell Th1 nTPM: 129.4
Samples: 4
Max nTPM: 213.4
Min nTPM: 54.9
RHH5210_R3581
147.9
RHH5302_R3668
213.4
RHH5238_R3610
54.9
RHH5267_R3639
101.3
Memory CD4 T-cell Th1/Th17 nTPM: 144.3
Samples: 4
Max nTPM: 262.0
Min nTPM: 58.4
RHH5303_R3669
262.0
RHH5211_R3582
161.9
RHH5239_R3611
58.4
RHH5268_R3640
95.0
Memory CD4 T-cell Th17 nTPM: 85.2
Samples: 4
Max nTPM: 119.6
Min nTPM: 48.5
RHH5304_R3670
111.2
RHH5212_R3583
119.6
RHH5240_R3612
48.5
RHH5269_R3641
61.4
Memory CD4 T-cell Th2 nTPM: 94.3
Samples: 4
Max nTPM: 120.9
Min nTPM: 77.8
RHH5305_R3671
98.9
RHH5213_R3584
77.8
RHH5241_R3613
120.9
RHH5270_R3642
79.5
Naive CD4 T-cell nTPM: 123.0
Samples: 4
Max nTPM: 159.4
Min nTPM: 80.5
RHH5306_R3672
159.4
RHH5214_R3585
155.8
RHH5242_R3614
96.3
RHH5271_R3643
80.5
Naive CD8 T-cell nTPM: 107.1
Samples: 4
Max nTPM: 158.3
Min nTPM: 42.1
RHH5201_R3572
115.9
RHH5229_R3601
42.1
RHH5258_R3630
158.3
RHH5287_R3659
111.9
Non-Vd2 gdTCR nTPM: 199.8
Samples: 4
Max nTPM: 284.1
Min nTPM: 110.1
RHH5235_R3607
110.1
RHH5264_R3636
276.2
RHH5207_R3578
128.7
RHH5299_R3665
284.1
T-reg nTPM: 129.1
Samples: 4
Max nTPM: 184.2
Min nTPM: 81.3
RHH5301_R3667
184.2
RHH5237_R3609
148.4
RHH5266_R3638
81.3
RHH5209_R3580
102.4
Terminal effector memory CD4 T-cell nTPM: 122.0
Samples: 2
Max nTPM: 174.9
Min nTPM: 69.0
RHH5243_R3615
69.0
RHH5272_R3644
174.9
Terminal effector memory CD8 T-cell nTPM: 200.1
Samples: 4
Max nTPM: 232.3
Min nTPM: 128.0
RHH5232_R3604
221.2
RHH5204_R3575
218.8
RHH5261_R3633
128.0
RHH5296_R3662
232.3
Vd2 gdTCR nTPM: 242.3
Samples: 4
Max nTPM: 357.3
Min nTPM: 157.0
RHH5234_R3606
225.1
RHH5206_R3577
229.7
RHH5263_R3635
157.0
RHH5298_R3664
357.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.