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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
137.7
nTPM
Monaco:
44.7
nTPM
Schmiedel:
13.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
137.7
HPA sample
nTPM
gdT-cell nTPM: 120.8
Samples: 6
Max nTPM: 152.9
Min nTPM: 71.8
P10809_1007
71.8
P10809_1022
139.2
P10809_1041
152.9
P10809_1060
103.4
P10809_1077
122.7
P10809_1098
134.7
MAIT T-cell nTPM: 131.2
Samples: 6
Max nTPM: 168.4
Min nTPM: 70.1
P10809_1006
70.1
P10809_1024
168.4
P10809_1043
159.9
P10809_1062
117.5
P10809_1083
117.4
P10809_1097
153.9
Memory CD4 T-cell nTPM: 110.4
Samples: 6
Max nTPM: 147.7
Min nTPM: 74.9
P10809_1014
74.9
P10809_1026
147.7
P10809_1045
123.2
P10809_1064
98.9
P10809_1086
101.7
P10809_1113
115.8
Memory CD8 T-cell nTPM: 117.0
Samples: 5
Max nTPM: 139.3
Min nTPM: 86.7
P10809_1012
86.7
P10809_1027
139.3
P10809_1046
133.6
P10809_1065
102.7
P10809_1111
122.5
Naive CD4 T-cell nTPM: 123.9
Samples: 6
Max nTPM: 176.6
Min nTPM: 68.6
P10809_1015
68.6
P10809_1030
135.6
P10809_1049
176.6
P10809_1068
107.7
P10809_1085
124.5
P10809_1112
130.6
Naive CD8 T-cell nTPM: 137.8
Samples: 6
Max nTPM: 167.9
Min nTPM: 105.0
P10809_1016
105.0
P10809_1031
167.9
P10809_1050
144.4
P10809_1069
133.0
P10809_1087
112.3
P10809_1110
163.9
T-reg nTPM: 79.3
Samples: 6
Max nTPM: 124.7
Min nTPM: 57.9
P10809_1018
57.9
P10809_1037
58.2
P10809_1056
124.7
P10809_1075
65.3
P10809_1094
95.6
P10809_1106
73.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
44.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 35.8
Samples: 4
Max nTPM: 44.7
Min nTPM: 30.4
RHH5202_R3573
35.6
RHH5230_R3602
30.4
RHH5259_R3631
32.6
RHH5288_R3660
44.7
Effector memory CD8 T-cell nTPM: 22.9
Samples: 4
Max nTPM: 35.8
Min nTPM: 17.0
RHH5203_R3574
17.5
RHH5231_R3603
35.8
RHH5260_R3632
21.3
RHH5289_R3661
17.0
MAIT T-cell nTPM: 33.9
Samples: 4
Max nTPM: 55.1
Min nTPM: 22.0
RHH5233_R3605
22.0
RHH5205_R3576
28.7
RHH5262_R3634
29.9
RHH5297_R3663
55.1
Memory CD4 T-cell TFH nTPM: 41.0
Samples: 4
Max nTPM: 61.5
Min nTPM: 26.0
RHH5300_R3666
26.0
RHH5236_R3608
61.5
RHH5265_R3637
29.8
RHH5208_R3579
46.8
Memory CD4 T-cell Th1 nTPM: 34.3
Samples: 4
Max nTPM: 49.6
Min nTPM: 20.7
RHH5210_R3581
49.6
RHH5302_R3668
40.4
RHH5238_R3610
26.3
RHH5267_R3639
20.7
Memory CD4 T-cell Th1/Th17 nTPM: 33.4
Samples: 4
Max nTPM: 52.0
Min nTPM: 18.3
RHH5303_R3669
52.0
RHH5211_R3582
33.3
RHH5239_R3611
18.3
RHH5268_R3640
29.9
Memory CD4 T-cell Th17 nTPM: 29.8
Samples: 4
Max nTPM: 47.6
Min nTPM: 17.7
RHH5304_R3670
27.4
RHH5212_R3583
47.6
RHH5240_R3612
17.7
RHH5269_R3641
26.6
Memory CD4 T-cell Th2 nTPM: 29.1
Samples: 4
Max nTPM: 32.6
Min nTPM: 25.4
RHH5305_R3671
25.4
RHH5213_R3584
32.6
RHH5241_R3613
31.5
RHH5270_R3642
26.8
Naive CD4 T-cell nTPM: 32.6
Samples: 4
Max nTPM: 47.8
Min nTPM: 25.5
RHH5306_R3672
30.0
RHH5214_R3585
47.8
RHH5242_R3614
27.2
RHH5271_R3643
25.5
Naive CD8 T-cell nTPM: 40.2
Samples: 4
Max nTPM: 56.1
Min nTPM: 28.3
RHH5201_R3572
28.3
RHH5229_R3601
34.7
RHH5258_R3630
56.1
RHH5287_R3659
41.8
Non-Vd2 gdTCR nTPM: 38.3
Samples: 4
Max nTPM: 53.0
Min nTPM: 22.6
RHH5235_R3607
28.4
RHH5264_R3636
49.3
RHH5207_R3578
22.6
RHH5299_R3665
53.0
T-reg nTPM: 32.4
Samples: 4
Max nTPM: 46.2
Min nTPM: 13.2
RHH5301_R3667
33.1
RHH5237_R3609
46.2
RHH5266_R3638
13.2
RHH5209_R3580
36.9
Terminal effector memory CD4 T-cell nTPM: 30.2
Samples: 2
Max nTPM: 34.8
Min nTPM: 25.5
RHH5243_R3615
25.5
RHH5272_R3644
34.8
Terminal effector memory CD8 T-cell nTPM: 40.9
Samples: 4
Max nTPM: 70.6
Min nTPM: 28.7
RHH5232_R3604
34.3
RHH5204_R3575
70.6
RHH5261_R3633
28.7
RHH5296_R3662
29.8
Vd2 gdTCR nTPM: 44.7
Samples: 4
Max nTPM: 67.3
Min nTPM: 24.4
RHH5234_R3606
29.3
RHH5206_R3577
67.3
RHH5263_R3635
24.4
RHH5298_R3664
57.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
