HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:5.0 nTPM
HPA Brain:17.7 nTPM
GTEx:5.0 nTPM
FANTOM5:20.1 Scaled Tags Per Million
Pig:8.1 nTPM
Mouse:9.0 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA051855
Glial cells Low
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.7
Sample id Sample description nTPM
Hippocampus
nTPM: 15.7
2148 Female, age 91, left hemisphere 19.8
1855 Male, age 76, left hemisphere 17.1
1911 Female, age 85, right hemisphere 14.8
2621 Female, age 67, right hemisphere 14.6
1898 Male, age 80, left hemisphere 14.2
2529 Female, age 94, left hemisphere 13.7
Dentate gyrus
nTPM: 16.0
2528 Male, age 74, both hemispheres 19.4
2246 Female, age 85, both hemispheres 16.5
2531 Female, age 67, both hemispheres 16.5
1927 Female, age 91, both hemispheres 16.0
2530 Female, age 94, left hemisphere 15.1
2010 Male, age 76, both hemispheres 12.6
Entorhinal gyrus
nTPM: 16.7
2613 Female, age 94, left hemisphere 19.3
2686 Male, age 75, right hemisphere 18.9
1787 Male, age 76, left hemisphere 17.0
2117 Female, age 91, right hemisphere 15.7
2764 Male, age 80, right hemisphere 15.6
1938 Female, age 85, left hemisphere 13.9
Hippocampus, CA1
nTPM: 16.8
2082 Female, age 91, right hemisphere 20.2
2749 Male, age 80, left hemisphere 16.5
1873 Female, age 85, both hemispheres 16.1
2527 Male, age 74, both hemispheres 15.8
2045 Male, age 76, both hemispheres 15.3
Hippocampus, CA2
nTPM: 15.8
2113 Female, age 91, right hemisphere 18.5
1940 Female, age 85, left hemisphere 16.9
1892 Male, age 76, both hemispheres 16.5
1963 Male, age 80, left hemisphere 16.0
2437 Female, age 94, left hemisphere 15.3
2249 Male, age 74, both hemispheres 11.5
Hippocampus, CA3
nTPM: 17.7
2620 Female, age 94, left hemisphere 21.4
2861 Female, age 67, both hemispheres 20.0
2137 Male, age 80, left hemisphere 19.1
1891 Female, age 85, both hemispheres 17.7
1867 Male, age 76, both hemispheres 15.2
2436 Male, age 74, both hemispheres 12.9
Parahippocampal cortex
nTPM: 16.0
2622 Female, age 67, right hemisphere 20.2
2693 Female, age 94, both hemispheres 17.8
2532 Female, age 72, left hemisphere 16.3
2692 Male, age 74, both hemispheres 16.3
1850 Male, age 80, both hemispheres 15.9
1933 Female, age 85, both hemispheres 15.6
1990 Female, age 91, right hemisphere 15.5
2245 Female, age 91, both hemispheres 15.3
2018 Male, age 76, both hemispheres 15.1
2250 Female, age 67, right hemisphere 12.6
Perirhinal gyrus
nTPM: 14.4
2848 Male, age 76, right hemisphere 19.1
1847 Female, age 91, left hemisphere 13.9
1794 Male, age 80, right hemisphere 13.7
2521 Female, age 94, right hemisphere 13.4
1841 Female, age 85, right hemisphere 12.2
Subiculum
nTPM: 16.6
2042 Male, age 76, both hemispheres 19.7
2729 Female, age 91, right hemisphere 17.6
2619 Male, age 74, both hemispheres 17.5
1901 Male, age 80, both hemispheres 17.4
1977 Female, age 85, both hemispheres 14.6
2438 Female, age 94, left hemisphere 12.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 5.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.0
Samples: 197

Max nTPM: 9.4
Min nTPM: 2.4
Std nTPM: 1.1
Median nTPM: 5.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 9.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 7.9
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 7.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 7.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 7.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 7.5
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 7.3
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 6.9
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 6.9
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 6.8
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 6.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.1
FF:10153-102I9 76 years, female 20.5
FF:10169-103B7 60 years, female 19.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.1
Pig sample Sample description nTPM
Subiculum
nTPM: 8.1
Samples: 4

Max nTPM: 8.6
Min nTPM: 7.5
Sample A Female 7.5
Sample B Female 8.6
Sample C Male 8.5
Sample D Male 7.9
Dorsal hippocampus
nTPM: 8.0
Samples: 4

Max nTPM: 8.3
Min nTPM: 7.3
Sample A Female 7.3
Sample B Female 8.3
Sample C Male 8.0
Sample D Male 8.3
Entorhinal cortex
nTPM: 8.1
Samples: 4

Max nTPM: 8.8
Min nTPM: 7.4
Sample A Female 7.6
Sample B Female 7.4
Sample C Male 8.5
Sample D Male 8.8
Ventral hippocampus
nTPM: 7.9
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.6
Sample A Female 8.5
Sample B Female 8.1
Sample C Male 8.3
Sample D Male 6.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.6
Samples: 4

Max nTPM: 10.0
Min nTPM: 6.8
Sample A Male 10.0
Sample B Male 9.0
Sample C Female 6.8
Sample D Female 8.5
Hippocampal formation
nTPM: 9.1
Samples: 4

Max nTPM: 10.0
Min nTPM: 7.9
Sample A Male 7.9
Sample B Male 8.5
Sample C Female 9.8
Sample D Female 10.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71763996 Antisense, RP_050921_03_A04, Mouse strain C57BL/6J (56 days, male) 0.0

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