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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
45.6
nTPM
Monaco:
134.5
nTPM
Schmiedel:
900.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
45.6
HPA sample
nTPM
gdT-cell nTPM: 35.6
Samples: 6
Max nTPM: 66.6
Min nTPM: 3.7
P10809_1007
66.6
P10809_1022
46.4
P10809_1041
27.8
P10809_1060
29.5
P10809_1077
39.5
P10809_1098
3.7
MAIT T-cell nTPM: 35.8
Samples: 6
Max nTPM: 64.4
Min nTPM: 5.1
P10809_1006
64.4
P10809_1024
38.6
P10809_1043
26.1
P10809_1062
40.0
P10809_1083
40.4
P10809_1097
5.1
Memory CD4 T-cell nTPM: 45.6
Samples: 6
Max nTPM: 80.5
Min nTPM: 7.4
P10809_1014
80.5
P10809_1026
63.2
P10809_1045
33.7
P10809_1064
46.3
P10809_1086
42.7
P10809_1113
7.4
Memory CD8 T-cell nTPM: 44.6
Samples: 5
Max nTPM: 80.9
Min nTPM: 20.8
P10809_1012
80.9
P10809_1027
45.7
P10809_1046
31.2
P10809_1065
44.5
P10809_1111
20.8
Naive CD4 T-cell nTPM: 38.6
Samples: 6
Max nTPM: 74.2
Min nTPM: 5.6
P10809_1015
74.2
P10809_1030
28.9
P10809_1049
21.7
P10809_1068
42.4
P10809_1085
59.0
P10809_1112
5.6
Naive CD8 T-cell nTPM: 42.9
Samples: 6
Max nTPM: 85.9
Min nTPM: 15.8
P10809_1016
85.9
P10809_1031
32.5
P10809_1050
28.8
P10809_1069
51.6
P10809_1087
42.5
P10809_1110
15.8
T-reg nTPM: 34.8
Samples: 6
Max nTPM: 87.1
Min nTPM: 3.9
P10809_1018
87.1
P10809_1037
28.6
P10809_1056
15.5
P10809_1075
38.2
P10809_1094
35.3
P10809_1106
3.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
134.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 134.5
Samples: 4
Max nTPM: 223.3
Min nTPM: 86.3
RHH5202_R3573
136.9
RHH5230_R3602
91.5
RHH5259_R3631
86.3
RHH5288_R3660
223.3
Effector memory CD8 T-cell nTPM: 100.8
Samples: 4
Max nTPM: 128.5
Min nTPM: 67.4
RHH5203_R3574
127.5
RHH5231_R3603
128.5
RHH5260_R3632
67.4
RHH5289_R3661
79.6
MAIT T-cell nTPM: 87.8
Samples: 4
Max nTPM: 107.6
Min nTPM: 52.4
RHH5233_R3605
93.9
RHH5205_R3576
52.4
RHH5262_R3634
97.4
RHH5297_R3663
107.6
Memory CD4 T-cell TFH nTPM: 132.7
Samples: 4
Max nTPM: 175.0
Min nTPM: 108.9
RHH5300_R3666
108.9
RHH5236_R3608
120.9
RHH5265_R3637
125.8
RHH5208_R3579
175.0
Memory CD4 T-cell Th1 nTPM: 102.1
Samples: 4
Max nTPM: 122.1
Min nTPM: 62.1
RHH5210_R3581
121.2
RHH5302_R3668
122.1
RHH5238_R3610
103.1
RHH5267_R3639
62.1
Memory CD4 T-cell Th1/Th17 nTPM: 122.0
Samples: 4
Max nTPM: 177.3
Min nTPM: 70.9
RHH5303_R3669
161.2
RHH5211_R3582
177.3
RHH5239_R3611
70.9
RHH5268_R3640
78.7
Memory CD4 T-cell Th17 nTPM: 92.5
Samples: 4
Max nTPM: 124.6
Min nTPM: 77.2
RHH5304_R3670
80.5
RHH5212_R3583
124.6
RHH5240_R3612
87.6
RHH5269_R3641
77.2
Memory CD4 T-cell Th2 nTPM: 116.6
Samples: 4
Max nTPM: 145.2
Min nTPM: 101.5
RHH5305_R3671
106.4
RHH5213_R3584
101.5
RHH5241_R3613
145.2
RHH5270_R3642
113.2
Naive CD4 T-cell nTPM: 118.2
Samples: 4
Max nTPM: 128.2
Min nTPM: 108.5
RHH5306_R3672
113.0
RHH5214_R3585
128.2
RHH5242_R3614
123.1
RHH5271_R3643
108.5
Naive CD8 T-cell nTPM: 92.1
Samples: 4
Max nTPM: 112.7
Min nTPM: 42.3
RHH5201_R3572
102.2
RHH5229_R3601
42.3
RHH5258_R3630
112.7
RHH5287_R3659
111.1
Non-Vd2 gdTCR nTPM: 104.9
Samples: 4
Max nTPM: 161.4
Min nTPM: 49.6
RHH5235_R3607
49.6
RHH5264_R3636
161.4
RHH5207_R3578
80.5
RHH5299_R3665
128.1
T-reg nTPM: 82.7
Samples: 4
Max nTPM: 97.5
Min nTPM: 65.2
RHH5301_R3667
88.9
RHH5237_R3609
97.5
RHH5266_R3638
65.2
RHH5209_R3580
79.2
Terminal effector memory CD4 T-cell nTPM: 98.9
Samples: 2
Max nTPM: 131.4
Min nTPM: 66.3
RHH5243_R3615
66.3
RHH5272_R3644
131.4
Terminal effector memory CD8 T-cell nTPM: 105.9
Samples: 4
Max nTPM: 132.8
Min nTPM: 77.9
RHH5232_R3604
132.8
RHH5204_R3575
110.1
RHH5261_R3633
77.9
RHH5296_R3662
102.7
Vd2 gdTCR nTPM: 106.2
Samples: 4
Max nTPM: 166.9
Min nTPM: 52.7
RHH5234_R3606
166.9
RHH5206_R3577
123.0
RHH5263_R3635
52.7
RHH5298_R3664
82.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
