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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
411.7
nTPM
Monaco:
646.9
nTPM
Schmiedel:
21.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
411.7
HPA sample
nTPM
gdT-cell nTPM: 303.5
Samples: 6
Max nTPM: 388.4
Min nTPM: 255.6
P10809_1007
287.5
P10809_1022
388.4
P10809_1041
279.7
P10809_1060
278.0
P10809_1077
255.6
P10809_1098
331.6
MAIT T-cell nTPM: 212.3
Samples: 6
Max nTPM: 244.5
Min nTPM: 191.3
P10809_1006
191.3
P10809_1024
244.5
P10809_1043
237.5
P10809_1062
197.2
P10809_1083
196.1
P10809_1097
207.1
Memory CD4 T-cell nTPM: 295.3
Samples: 6
Max nTPM: 325.2
Min nTPM: 270.8
P10809_1014
272.6
P10809_1026
325.2
P10809_1045
270.8
P10809_1064
306.8
P10809_1086
308.2
P10809_1113
287.9
Memory CD8 T-cell nTPM: 306.9
Samples: 5
Max nTPM: 325.7
Min nTPM: 291.9
P10809_1012
307.9
P10809_1027
295.6
P10809_1046
325.7
P10809_1065
313.2
P10809_1111
291.9
Naive CD4 T-cell nTPM: 276.4
Samples: 6
Max nTPM: 307.6
Min nTPM: 230.3
P10809_1015
230.3
P10809_1030
280.7
P10809_1049
307.6
P10809_1068
284.0
P10809_1085
271.0
P10809_1112
284.5
Naive CD8 T-cell nTPM: 267.5
Samples: 6
Max nTPM: 324.7
Min nTPM: 240.2
P10809_1016
244.3
P10809_1031
240.2
P10809_1050
262.9
P10809_1069
324.7
P10809_1087
286.2
P10809_1110
246.4
T-reg nTPM: 411.8
Samples: 6
Max nTPM: 552.2
Min nTPM: 353.8
P10809_1018
403.0
P10809_1037
353.8
P10809_1056
552.2
P10809_1075
379.6
P10809_1094
401.9
P10809_1106
380.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
646.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 547.1
Samples: 4
Max nTPM: 642.6
Min nTPM: 324.8
RHH5202_R3573
642.6
RHH5230_R3602
589.9
RHH5259_R3631
324.8
RHH5288_R3660
631.0
Effector memory CD8 T-cell nTPM: 591.3
Samples: 4
Max nTPM: 672.5
Min nTPM: 436.2
RHH5203_R3574
642.6
RHH5231_R3603
672.5
RHH5260_R3632
436.2
RHH5289_R3661
613.7
MAIT T-cell nTPM: 375.9
Samples: 4
Max nTPM: 404.7
Min nTPM: 319.6
RHH5233_R3605
404.7
RHH5205_R3576
319.6
RHH5262_R3634
391.2
RHH5297_R3663
387.9
Memory CD4 T-cell TFH nTPM: 646.9
Samples: 4
Max nTPM: 788.1
Min nTPM: 575.8
RHH5300_R3666
588.1
RHH5236_R3608
788.1
RHH5265_R3637
575.8
RHH5208_R3579
635.5
Memory CD4 T-cell Th1 nTPM: 495.7
Samples: 4
Max nTPM: 573.0
Min nTPM: 355.4
RHH5210_R3581
552.6
RHH5302_R3668
573.0
RHH5238_R3610
355.4
RHH5267_R3639
501.9
Memory CD4 T-cell Th1/Th17 nTPM: 444.9
Samples: 4
Max nTPM: 598.6
Min nTPM: 259.0
RHH5303_R3669
598.6
RHH5211_R3582
516.1
RHH5239_R3611
259.0
RHH5268_R3640
405.8
Memory CD4 T-cell Th17 nTPM: 451.8
Samples: 4
Max nTPM: 493.1
Min nTPM: 399.0
RHH5304_R3670
466.5
RHH5212_R3583
493.1
RHH5240_R3612
448.5
RHH5269_R3641
399.0
Memory CD4 T-cell Th2 nTPM: 552.3
Samples: 4
Max nTPM: 579.4
Min nTPM: 525.5
RHH5305_R3671
579.4
RHH5213_R3584
558.1
RHH5241_R3613
525.5
RHH5270_R3642
546.0
Naive CD4 T-cell nTPM: 551.0
Samples: 4
Max nTPM: 667.5
Min nTPM: 475.2
RHH5306_R3672
570.2
RHH5214_R3585
667.5
RHH5242_R3614
475.2
RHH5271_R3643
491.2
Naive CD8 T-cell nTPM: 420.0
Samples: 4
Max nTPM: 494.5
Min nTPM: 262.5
RHH5201_R3572
494.5
RHH5229_R3601
262.5
RHH5258_R3630
478.7
RHH5287_R3659
444.4
Non-Vd2 gdTCR nTPM: 427.3
Samples: 4
Max nTPM: 488.9
Min nTPM: 309.1
RHH5235_R3607
309.1
RHH5264_R3636
445.0
RHH5207_R3578
488.9
RHH5299_R3665
466.0
T-reg nTPM: 525.1
Samples: 4
Max nTPM: 705.0
Min nTPM: 409.3
RHH5301_R3667
539.9
RHH5237_R3609
705.0
RHH5266_R3638
446.1
RHH5209_R3580
409.3
Terminal effector memory CD4 T-cell nTPM: 454.1
Samples: 2
Max nTPM: 523.0
Min nTPM: 385.2
RHH5243_R3615
385.2
RHH5272_R3644
523.0
Terminal effector memory CD8 T-cell nTPM: 484.5
Samples: 4
Max nTPM: 679.4
Min nTPM: 304.2
RHH5232_R3604
503.3
RHH5204_R3575
450.9
RHH5261_R3633
304.2
RHH5296_R3662
679.4
Vd2 gdTCR nTPM: 516.4
Samples: 4
Max nTPM: 657.8
Min nTPM: 427.5
RHH5234_R3606
481.7
RHH5206_R3577
657.8
RHH5263_R3635
427.5
RHH5298_R3664
498.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.