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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
252.7
nTPM
Monaco:
167.4
nTPM
Schmiedel:
460.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
252.7
HPA sample
nTPM
gdT-cell nTPM: 209.2
Samples: 6
Max nTPM: 254.1
Min nTPM: 154.5
P10809_1007
169.6
P10809_1022
254.1
P10809_1041
225.8
P10809_1060
154.5
P10809_1077
209.5
P10809_1098
241.8
MAIT T-cell nTPM: 184.7
Samples: 6
Max nTPM: 222.0
Min nTPM: 119.2
P10809_1006
119.2
P10809_1024
222.0
P10809_1043
198.4
P10809_1062
172.2
P10809_1083
174.6
P10809_1097
222.0
Memory CD4 T-cell nTPM: 147.9
Samples: 6
Max nTPM: 173.1
Min nTPM: 105.2
P10809_1014
105.2
P10809_1026
165.4
P10809_1045
125.3
P10809_1064
173.1
P10809_1086
159.9
P10809_1113
158.7
Memory CD8 T-cell nTPM: 204.6
Samples: 5
Max nTPM: 259.5
Min nTPM: 144.1
P10809_1012
144.1
P10809_1027
259.5
P10809_1046
204.3
P10809_1065
202.7
P10809_1111
212.3
Naive CD4 T-cell nTPM: 39.4
Samples: 6
Max nTPM: 70.5
Min nTPM: 29.5
P10809_1015
29.5
P10809_1030
33.7
P10809_1049
37.0
P10809_1068
29.6
P10809_1085
70.5
P10809_1112
36.1
Naive CD8 T-cell nTPM: 120.2
Samples: 6
Max nTPM: 192.4
Min nTPM: 33.7
P10809_1016
33.7
P10809_1031
115.3
P10809_1050
131.8
P10809_1069
182.4
P10809_1087
192.4
P10809_1110
65.5
T-reg nTPM: 252.7
Samples: 6
Max nTPM: 297.7
Min nTPM: 217.9
P10809_1018
217.9
P10809_1037
259.3
P10809_1056
297.7
P10809_1075
236.3
P10809_1094
220.7
P10809_1106
284.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
167.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 70.1
Samples: 4
Max nTPM: 127.2
Min nTPM: 34.9
RHH5202_R3573
73.9
RHH5230_R3602
34.9
RHH5259_R3631
44.4
RHH5288_R3660
127.2
Effector memory CD8 T-cell nTPM: 107.8
Samples: 4
Max nTPM: 139.2
Min nTPM: 70.5
RHH5203_R3574
110.1
RHH5231_R3603
139.2
RHH5260_R3632
70.5
RHH5289_R3661
111.4
MAIT T-cell nTPM: 100.0
Samples: 4
Max nTPM: 135.8
Min nTPM: 51.2
RHH5233_R3605
135.8
RHH5205_R3576
51.2
RHH5262_R3634
94.9
RHH5297_R3663
118.0
Memory CD4 T-cell TFH nTPM: 70.5
Samples: 4
Max nTPM: 84.8
Min nTPM: 57.0
RHH5300_R3666
84.8
RHH5236_R3608
79.6
RHH5265_R3637
60.5
RHH5208_R3579
57.0
Memory CD4 T-cell Th1 nTPM: 78.6
Samples: 4
Max nTPM: 128.5
Min nTPM: 51.7
RHH5210_R3581
61.7
RHH5302_R3668
128.5
RHH5238_R3610
72.6
RHH5267_R3639
51.7
Memory CD4 T-cell Th1/Th17 nTPM: 88.9
Samples: 4
Max nTPM: 144.8
Min nTPM: 37.6
RHH5303_R3669
144.8
RHH5211_R3582
100.2
RHH5239_R3611
37.6
RHH5268_R3640
72.8
Memory CD4 T-cell Th17 nTPM: 81.5
Samples: 4
Max nTPM: 120.5
Min nTPM: 61.2
RHH5304_R3670
70.2
RHH5212_R3583
120.5
RHH5240_R3612
73.9
RHH5269_R3641
61.2
Memory CD4 T-cell Th2 nTPM: 85.4
Samples: 4
Max nTPM: 101.0
Min nTPM: 63.4
RHH5305_R3671
95.6
RHH5213_R3584
81.4
RHH5241_R3613
101.0
RHH5270_R3642
63.4
Naive CD4 T-cell nTPM: 22.3
Samples: 4
Max nTPM: 32.8
Min nTPM: 15.1
RHH5306_R3672
16.2
RHH5214_R3585
32.8
RHH5242_R3614
25.2
RHH5271_R3643
15.1
Naive CD8 T-cell nTPM: 14.4
Samples: 4
Max nTPM: 26.3
Min nTPM: 5.8
RHH5201_R3572
16.5
RHH5229_R3601
5.8
RHH5258_R3630
26.3
RHH5287_R3659
8.9
Non-Vd2 gdTCR nTPM: 142.0
Samples: 4
Max nTPM: 194.9
Min nTPM: 49.2
RHH5235_R3607
49.2
RHH5264_R3636
160.0
RHH5207_R3578
163.9
RHH5299_R3665
194.9
T-reg nTPM: 93.5
Samples: 4
Max nTPM: 133.7
Min nTPM: 45.9
RHH5301_R3667
133.7
RHH5237_R3609
132.5
RHH5266_R3638
45.9
RHH5209_R3580
61.9
Terminal effector memory CD4 T-cell nTPM: 82.3
Samples: 2
Max nTPM: 102.6
Min nTPM: 62.0
RHH5243_R3615
62.0
RHH5272_R3644
102.6
Terminal effector memory CD8 T-cell nTPM: 167.4
Samples: 4
Max nTPM: 231.2
Min nTPM: 83.6
RHH5232_R3604
154.0
RHH5204_R3575
200.9
RHH5261_R3633
83.6
RHH5296_R3662
231.2
Vd2 gdTCR nTPM: 129.4
Samples: 4
Max nTPM: 183.0
Min nTPM: 57.8
RHH5234_R3606
93.7
RHH5206_R3577
183.0
RHH5263_R3635
57.8
RHH5298_R3664
183.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
