HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:67.5 nTPM
HPA Brain:135.3 nTPM
GTEx:67.5 nTPM
FANTOM5:25.7 Scaled Tags Per Million
Pig:45.2 nTPM
Mouse:59.9 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026288Antibody CAB009626
Glial cells Not detectedMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 135.3
Sample id Sample description nTPM
Hippocampus
nTPM: 115.9
2529 Female, age 94, left hemisphere 133.5
2148 Female, age 91, left hemisphere 120.1
2621 Female, age 67, right hemisphere 115.3
1855 Male, age 76, left hemisphere 113.3
1911 Female, age 85, right hemisphere 113.1
1898 Male, age 80, left hemisphere 100.2
Dentate gyrus
nTPM: 115.1
2531 Female, age 67, both hemispheres 127.3
2530 Female, age 94, left hemisphere 121.2
2010 Male, age 76, both hemispheres 115.8
1927 Female, age 91, both hemispheres 112.5
2246 Female, age 85, both hemispheres 107.8
2528 Male, age 74, both hemispheres 106.0
Entorhinal gyrus
nTPM: 135.3
2686 Male, age 75, right hemisphere 151.0
2613 Female, age 94, left hemisphere 149.3
2764 Male, age 80, right hemisphere 141.3
1787 Male, age 76, left hemisphere 129.6
1938 Female, age 85, left hemisphere 128.5
2117 Female, age 91, right hemisphere 111.9
Hippocampus, CA1
nTPM: 112.4
2082 Female, age 91, right hemisphere 125.8
2045 Male, age 76, both hemispheres 121.7
2527 Male, age 74, both hemispheres 106.6
1873 Female, age 85, both hemispheres 106.2
2749 Male, age 80, left hemisphere 101.5
Hippocampus, CA2
nTPM: 113.7
2437 Female, age 94, left hemisphere 137.3
2113 Female, age 91, right hemisphere 122.1
1892 Male, age 76, both hemispheres 110.4
1940 Female, age 85, left hemisphere 105.5
1963 Male, age 80, left hemisphere 104.4
2249 Male, age 74, both hemispheres 102.4
Hippocampus, CA3
nTPM: 119.9
2620 Female, age 94, left hemisphere 139.2
2861 Female, age 67, both hemispheres 138.3
1891 Female, age 85, both hemispheres 115.4
1867 Male, age 76, both hemispheres 112.0
2137 Male, age 80, left hemisphere 107.3
2436 Male, age 74, both hemispheres 107.1
Parahippocampal cortex
nTPM: 128.6
2622 Female, age 67, right hemisphere 151.9
2692 Male, age 74, both hemispheres 143.7
2018 Male, age 76, both hemispheres 133.5
1990 Female, age 91, right hemisphere 129.8
2532 Female, age 72, left hemisphere 128.9
2693 Female, age 94, both hemispheres 127.7
2245 Female, age 91, both hemispheres 122.7
2250 Female, age 67, right hemisphere 117.3
1933 Female, age 85, both hemispheres 116.1
1850 Male, age 80, both hemispheres 113.9
Perirhinal gyrus
nTPM: 118.5
1794 Male, age 80, right hemisphere 122.1
2848 Male, age 76, right hemisphere 120.6
2521 Female, age 94, right hemisphere 119.1
1847 Female, age 91, left hemisphere 118.7
1841 Female, age 85, right hemisphere 111.9
Subiculum
nTPM: 128.1
2438 Female, age 94, left hemisphere 147.5
2619 Male, age 74, both hemispheres 136.6
2042 Male, age 76, both hemispheres 132.6
1977 Female, age 85, both hemispheres 120.3
2729 Female, age 91, right hemisphere 118.8
1901 Male, age 80, both hemispheres 112.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 67.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 67.5
Samples: 197

Max nTPM: 104.3
Min nTPM: 44.6
Std nTPM: 11.5
Median nTPM: 66.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 104.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 101.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 97.8
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 97.6
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 94.9
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 91.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 91.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 91.4
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 91.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 90.6
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 89.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.7
FF:10153-102I9 76 years, female 38.0
FF:10169-103B7 60 years, female 13.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.2
Pig sample Sample description nTPM
Subiculum
nTPM: 45.2
Samples: 4

Max nTPM: 57.5
Min nTPM: 37.5
Sample A Female 57.5
Sample B Female 42.4
Sample C Male 43.5
Sample D Male 37.5
Dorsal hippocampus
nTPM: 40.6
Samples: 4

Max nTPM: 46.7
Min nTPM: 32.6
Sample A Female 46.7
Sample B Female 39.8
Sample C Male 43.2
Sample D Male 32.6
Entorhinal cortex
nTPM: 45.0
Samples: 4

Max nTPM: 47.4
Min nTPM: 42.1
Sample A Female 44.9
Sample B Female 42.1
Sample C Male 47.4
Sample D Male 45.6
Ventral hippocampus
nTPM: 42.2
Samples: 4

Max nTPM: 54.8
Min nTPM: 34.5
Sample A Female 38.9
Sample B Female 34.5
Sample C Male 54.8
Sample D Male 40.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.9
Samples: 4

Max nTPM: 66.2
Min nTPM: 51.4
Sample A Male 60.8
Sample B Male 66.2
Sample C Female 51.4
Sample D Female 61.1
Hippocampal formation
nTPM: 50.6
Samples: 4

Max nTPM: 52.8
Min nTPM: 47.3
Sample A Male 47.3
Sample B Male 50.5
Sample C Female 52.8
Sample D Female 51.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
68563006 Antisense, RP_050120_02_H10, Mouse strain C57BL/6J (56 days, male) 6.6

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