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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
102.3
nTPM
Monaco:
56.6
nTPM
Schmiedel:
41.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
102.3
HPA sample
nTPM
gdT-cell nTPM: 68.4
Samples: 6
Max nTPM: 82.1
Min nTPM: 52.9
P10809_1007
52.9
P10809_1022
71.5
P10809_1041
82.1
P10809_1060
54.2
P10809_1077
67.6
P10809_1098
81.9
MAIT T-cell nTPM: 55.7
Samples: 6
Max nTPM: 72.1
Min nTPM: 44.0
P10809_1006
49.1
P10809_1024
44.0
P10809_1043
44.7
P10809_1062
52.7
P10809_1083
71.6
P10809_1097
72.1
Memory CD4 T-cell nTPM: 67.1
Samples: 6
Max nTPM: 85.5
Min nTPM: 55.4
P10809_1014
57.8
P10809_1026
67.9
P10809_1045
55.4
P10809_1064
65.2
P10809_1086
85.5
P10809_1113
70.5
Memory CD8 T-cell nTPM: 58.1
Samples: 5
Max nTPM: 65.7
Min nTPM: 53.6
P10809_1012
58.8
P10809_1027
65.7
P10809_1046
53.6
P10809_1065
54.9
P10809_1111
57.3
Naive CD4 T-cell nTPM: 59.5
Samples: 6
Max nTPM: 70.4
Min nTPM: 51.3
P10809_1015
51.3
P10809_1030
55.2
P10809_1049
57.7
P10809_1068
63.9
P10809_1085
70.4
P10809_1112
58.3
Naive CD8 T-cell nTPM: 53.1
Samples: 6
Max nTPM: 76.6
Min nTPM: 39.6
P10809_1016
39.6
P10809_1031
59.4
P10809_1050
41.8
P10809_1069
50.1
P10809_1087
76.6
P10809_1110
50.8
T-reg nTPM: 102.3
Samples: 6
Max nTPM: 131.9
Min nTPM: 77.3
P10809_1018
92.5
P10809_1037
100.5
P10809_1056
123.2
P10809_1075
77.3
P10809_1094
131.9
P10809_1106
88.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
56.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 31.1
Samples: 4
Max nTPM: 46.1
Min nTPM: 22.9
RHH5202_R3573
46.1
RHH5230_R3602
26.3
RHH5259_R3631
29.1
RHH5288_R3660
22.9
Effector memory CD8 T-cell nTPM: 44.8
Samples: 4
Max nTPM: 70.2
Min nTPM: 23.7
RHH5203_R3574
70.2
RHH5231_R3603
34.1
RHH5260_R3632
23.7
RHH5289_R3661
51.2
MAIT T-cell nTPM: 32.9
Samples: 4
Max nTPM: 36.2
Min nTPM: 28.8
RHH5233_R3605
36.2
RHH5205_R3576
33.9
RHH5262_R3634
32.7
RHH5297_R3663
28.8
Memory CD4 T-cell TFH nTPM: 46.1
Samples: 4
Max nTPM: 70.2
Min nTPM: 21.7
RHH5300_R3666
21.7
RHH5236_R3608
32.1
RHH5265_R3637
60.2
RHH5208_R3579
70.2
Memory CD4 T-cell Th1 nTPM: 45.5
Samples: 4
Max nTPM: 62.4
Min nTPM: 36.6
RHH5210_R3581
62.4
RHH5302_R3668
43.7
RHH5238_R3610
39.4
RHH5267_R3639
36.6
Memory CD4 T-cell Th1/Th17 nTPM: 38.4
Samples: 4
Max nTPM: 62.1
Min nTPM: 19.0
RHH5303_R3669
41.7
RHH5211_R3582
62.1
RHH5239_R3611
19.0
RHH5268_R3640
30.9
Memory CD4 T-cell Th17 nTPM: 47.8
Samples: 4
Max nTPM: 64.4
Min nTPM: 37.1
RHH5304_R3670
48.7
RHH5212_R3583
64.4
RHH5240_R3612
40.8
RHH5269_R3641
37.1
Memory CD4 T-cell Th2 nTPM: 55.4
Samples: 4
Max nTPM: 76.1
Min nTPM: 42.8
RHH5305_R3671
42.8
RHH5213_R3584
76.1
RHH5241_R3613
57.1
RHH5270_R3642
45.7
Naive CD4 T-cell nTPM: 39.9
Samples: 4
Max nTPM: 61.5
Min nTPM: 28.2
RHH5306_R3672
40.3
RHH5214_R3585
61.5
RHH5242_R3614
28.2
RHH5271_R3643
29.7
Naive CD8 T-cell nTPM: 28.4
Samples: 4
Max nTPM: 44.4
Min nTPM: 15.2
RHH5201_R3572
44.4
RHH5229_R3601
20.9
RHH5258_R3630
32.9
RHH5287_R3659
15.2
Non-Vd2 gdTCR nTPM: 39.5
Samples: 4
Max nTPM: 58.7
Min nTPM: 18.2
RHH5235_R3607
18.2
RHH5264_R3636
47.2
RHH5207_R3578
58.7
RHH5299_R3665
33.9
T-reg nTPM: 56.6
Samples: 4
Max nTPM: 69.0
Min nTPM: 49.5
RHH5301_R3667
49.5
RHH5237_R3609
51.0
RHH5266_R3638
57.0
RHH5209_R3580
69.0
Terminal effector memory CD4 T-cell nTPM: 42.7
Samples: 2
Max nTPM: 53.9
Min nTPM: 31.4
RHH5243_R3615
31.4
RHH5272_R3644
53.9
Terminal effector memory CD8 T-cell nTPM: 44.0
Samples: 4
Max nTPM: 77.9
Min nTPM: 28.7
RHH5232_R3604
33.1
RHH5204_R3575
77.9
RHH5261_R3633
28.7
RHH5296_R3662
36.2
Vd2 gdTCR nTPM: 39.2
Samples: 4
Max nTPM: 60.0
Min nTPM: 22.6
RHH5234_R3606
41.9
RHH5206_R3577
60.0
RHH5263_R3635
32.4
RHH5298_R3664
22.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
