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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
30.0
nTPM
Monaco:
25.8
nTPM
Schmiedel:
181.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
30.0
HPA sample
nTPM
gdT-cell nTPM: 15.3
Samples: 6
Max nTPM: 21.6
Min nTPM: 9.4
P10809_1007
9.6
P10809_1022
18.9
P10809_1041
21.6
P10809_1060
15.4
P10809_1077
9.4
P10809_1098
16.9
MAIT T-cell nTPM: 21.3
Samples: 6
Max nTPM: 32.9
Min nTPM: 14.6
P10809_1006
14.7
P10809_1024
32.9
P10809_1043
14.6
P10809_1062
19.2
P10809_1083
23.4
P10809_1097
23.1
Memory CD4 T-cell nTPM: 25.2
Samples: 6
Max nTPM: 36.3
Min nTPM: 15.5
P10809_1014
15.5
P10809_1026
33.0
P10809_1045
36.3
P10809_1064
18.8
P10809_1086
17.5
P10809_1113
29.8
Memory CD8 T-cell nTPM: 21.0
Samples: 5
Max nTPM: 34.8
Min nTPM: 5.3
P10809_1012
5.3
P10809_1027
34.8
P10809_1046
29.4
P10809_1065
13.9
P10809_1111
21.8
Naive CD4 T-cell nTPM: 15.3
Samples: 6
Max nTPM: 29.8
Min nTPM: 6.7
P10809_1015
6.7
P10809_1030
15.5
P10809_1049
29.8
P10809_1068
15.5
P10809_1085
10.4
P10809_1112
13.9
Naive CD8 T-cell nTPM: 14.8
Samples: 6
Max nTPM: 20.7
Min nTPM: 5.6
P10809_1016
5.6
P10809_1031
20.0
P10809_1050
20.7
P10809_1069
9.3
P10809_1087
15.6
P10809_1110
17.5
T-reg nTPM: 30.0
Samples: 6
Max nTPM: 39.8
Min nTPM: 16.8
P10809_1018
16.8
P10809_1037
39.8
P10809_1056
37.6
P10809_1075
22.7
P10809_1094
31.2
P10809_1106
32.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
25.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 10.5
Samples: 4
Max nTPM: 21.5
Min nTPM: 4.5
RHH5202_R3573
6.7
RHH5230_R3602
4.5
RHH5259_R3631
9.3
RHH5288_R3660
21.5
Effector memory CD8 T-cell nTPM: 6.0
Samples: 4
Max nTPM: 10.4
Min nTPM: 2.3
RHH5203_R3574
3.5
RHH5231_R3603
10.4
RHH5260_R3632
7.9
RHH5289_R3661
2.3
MAIT T-cell nTPM: 11.5
Samples: 4
Max nTPM: 19.2
Min nTPM: 3.1
RHH5233_R3605
19.2
RHH5205_R3576
15.3
RHH5262_R3634
3.1
RHH5297_R3663
8.5
Memory CD4 T-cell TFH nTPM: 16.6
Samples: 4
Max nTPM: 21.6
Min nTPM: 14.1
RHH5300_R3666
14.1
RHH5236_R3608
15.2
RHH5265_R3637
21.6
RHH5208_R3579
15.3
Memory CD4 T-cell Th1 nTPM: 9.8
Samples: 4
Max nTPM: 13.7
Min nTPM: 1.3
RHH5210_R3581
12.5
RHH5302_R3668
11.8
RHH5238_R3610
1.3
RHH5267_R3639
13.7
Memory CD4 T-cell Th1/Th17 nTPM: 12.3
Samples: 4
Max nTPM: 18.8
Min nTPM: 6.1
RHH5303_R3669
18.1
RHH5211_R3582
18.8
RHH5239_R3611
6.1
RHH5268_R3640
6.1
Memory CD4 T-cell Th17 nTPM: 16.6
Samples: 4
Max nTPM: 23.6
Min nTPM: 9.6
RHH5304_R3670
13.4
RHH5212_R3583
23.6
RHH5240_R3612
9.6
RHH5269_R3641
19.9
Memory CD4 T-cell Th2 nTPM: 25.8
Samples: 4
Max nTPM: 41.7
Min nTPM: 17.4
RHH5305_R3671
41.7
RHH5213_R3584
17.6
RHH5241_R3613
17.4
RHH5270_R3642
26.4
Naive CD4 T-cell nTPM: 11.2
Samples: 4
Max nTPM: 21.7
Min nTPM: 0.1
RHH5306_R3672
13.1
RHH5214_R3585
21.7
RHH5242_R3614
0.1
RHH5271_R3643
10.0
Naive CD8 T-cell nTPM: 6.0
Samples: 4
Max nTPM: 7.9
Min nTPM: 2.9
RHH5201_R3572
2.9
RHH5229_R3601
6.1
RHH5258_R3630
6.9
RHH5287_R3659
7.9
Non-Vd2 gdTCR nTPM: 5.4
Samples: 4
Max nTPM: 11.1
Min nTPM: 3.1
RHH5235_R3607
3.1
RHH5264_R3636
11.1
RHH5207_R3578
3.8
RHH5299_R3665
3.4
T-reg nTPM: 15.6
Samples: 4
Max nTPM: 20.7
Min nTPM: 7.0
RHH5301_R3667
17.4
RHH5237_R3609
20.7
RHH5266_R3638
7.0
RHH5209_R3580
17.1
Terminal effector memory CD4 T-cell nTPM: 7.3
Samples: 2
Max nTPM: 9.0
Min nTPM: 5.5
RHH5243_R3615
5.5
RHH5272_R3644
9.0
Terminal effector memory CD8 T-cell nTPM: 9.1
Samples: 4
Max nTPM: 14.6
Min nTPM: 3.6
RHH5232_R3604
14.6
RHH5204_R3575
13.1
RHH5261_R3633
4.9
RHH5296_R3662
3.6
Vd2 gdTCR nTPM: 7.6
Samples: 4
Max nTPM: 11.5
Min nTPM: 2.8
RHH5234_R3606
11.5
RHH5206_R3577
6.2
RHH5263_R3635
2.8
RHH5298_R3664
9.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
