HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:50.2 nTPM
HPA Brain:51.4 nTPM
GTEx:50.2 nTPM
FANTOM5:47.5 Scaled Tags Per Million
Pig:26.9 nTPM
Mouse:14.3 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063078
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.4
Sample id Sample description nTPM
Hippocampus
nTPM: 51.4
1911 Female, age 85, right hemisphere 55.5
2148 Female, age 91, left hemisphere 54.7
1898 Male, age 80, left hemisphere 53.4
2529 Female, age 94, left hemisphere 51.1
1855 Male, age 76, left hemisphere 50.9
2621 Female, age 67, right hemisphere 43.0
Dentate gyrus
nTPM: 46.4
2530 Female, age 94, left hemisphere 62.5
2528 Male, age 74, both hemispheres 55.7
2246 Female, age 85, both hemispheres 44.9
2010 Male, age 76, both hemispheres 41.4
1927 Female, age 91, both hemispheres 38.8
2531 Female, age 67, both hemispheres 35.3
Entorhinal gyrus
nTPM: 44.1
2117 Female, age 91, right hemisphere 64.5
2764 Male, age 80, right hemisphere 44.7
1787 Male, age 76, left hemisphere 41.3
2613 Female, age 94, left hemisphere 39.7
1938 Female, age 85, left hemisphere 38.2
2686 Male, age 75, right hemisphere 36.4
Hippocampus, CA1
nTPM: 43.5
2082 Female, age 91, right hemisphere 50.7
2527 Male, age 74, both hemispheres 49.1
1873 Female, age 85, both hemispheres 44.9
2749 Male, age 80, left hemisphere 42.4
2045 Male, age 76, both hemispheres 30.2
Hippocampus, CA2
nTPM: 47.7
1963 Male, age 80, left hemisphere 71.0
2113 Female, age 91, right hemisphere 51.8
2249 Male, age 74, both hemispheres 51.8
1940 Female, age 85, left hemisphere 43.5
2437 Female, age 94, left hemisphere 40.5
1892 Male, age 76, both hemispheres 27.7
Hippocampus, CA3
nTPM: 43.9
2861 Female, age 67, both hemispheres 53.1
1891 Female, age 85, both hemispheres 50.0
2620 Female, age 94, left hemisphere 45.2
2137 Male, age 80, left hemisphere 42.4
2436 Male, age 74, both hemispheres 37.9
1867 Male, age 76, both hemispheres 34.9
Parahippocampal cortex
nTPM: 36.3
2692 Male, age 74, both hemispheres 50.7
2018 Male, age 76, both hemispheres 43.8
1990 Female, age 91, right hemisphere 39.0
2245 Female, age 91, both hemispheres 37.1
2622 Female, age 67, right hemisphere 35.3
1933 Female, age 85, both hemispheres 34.6
1850 Male, age 80, both hemispheres 34.2
2532 Female, age 72, left hemisphere 32.2
2250 Female, age 67, right hemisphere 29.7
2693 Female, age 94, both hemispheres 26.3
Perirhinal gyrus
nTPM: 27.6
1794 Male, age 80, right hemisphere 37.1
2848 Male, age 76, right hemisphere 26.8
1847 Female, age 91, left hemisphere 26.6
1841 Female, age 85, right hemisphere 25.2
2521 Female, age 94, right hemisphere 22.5
Subiculum
nTPM: 51.3
2042 Male, age 76, both hemispheres 67.9
2729 Female, age 91, right hemisphere 61.2
2619 Male, age 74, both hemispheres 52.6
1901 Male, age 80, both hemispheres 50.5
1977 Female, age 85, both hemispheres 42.8
2438 Female, age 94, left hemisphere 32.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 50.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 50.2
Samples: 197

Max nTPM: 124.8
Min nTPM: 17.1
Std nTPM: 15.9
Median nTPM: 49.2
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 124.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 94.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 89.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 85.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 85.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 84.7
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 84.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 83.8
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 83.2
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 81.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 80.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.5
FF:10153-102I9 76 years, female 57.7
FF:10169-103B7 60 years, female 37.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.9
Pig sample Sample description nTPM
Subiculum
nTPM: 24.4
Samples: 4

Max nTPM: 30.4
Min nTPM: 20.9
Sample A Female 30.4
Sample B Female 20.9
Sample C Male 22.9
Sample D Male 23.5
Dorsal hippocampus
nTPM: 26.1
Samples: 4

Max nTPM: 32.9
Min nTPM: 21.7
Sample A Female 32.9
Sample B Female 23.6
Sample C Male 26.0
Sample D Male 21.7
Entorhinal cortex
nTPM: 23.5
Samples: 4

Max nTPM: 27.1
Min nTPM: 18.8
Sample A Female 27.1
Sample B Female 21.7
Sample C Male 26.5
Sample D Male 18.8
Ventral hippocampus
nTPM: 27.0
Samples: 4

Max nTPM: 34.7
Min nTPM: 23.0
Sample A Female 26.5
Sample B Female 23.6
Sample C Male 34.7
Sample D Male 23.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.0
Samples: 4

Max nTPM: 13.6
Min nTPM: 12.5
Sample A Male 13.0
Sample B Male 12.8
Sample C Female 13.6
Sample D Female 12.5
Hippocampal formation
nTPM: 14.3
Samples: 4

Max nTPM: 16.6
Min nTPM: 11.8
Sample A Male 12.4
Sample B Male 11.8
Sample C Female 16.5
Sample D Female 16.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
69980160 Antisense, RP_050512_04_A04, Mouse strain C57BL/6J (56 days, male) 0.9

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