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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
42.3
nTPM
Monaco:
211.6
nTPM
Schmiedel:
120.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
42.3
HPA sample
nTPM
gdT-cell nTPM: 29.6
Samples: 6
Max nTPM: 42.7
Min nTPM: 21.4
P10809_1007
21.4
P10809_1022
36.7
P10809_1041
25.1
P10809_1060
42.7
P10809_1077
24.8
P10809_1098
26.8
MAIT T-cell nTPM: 28.1
Samples: 6
Max nTPM: 34.4
Min nTPM: 23.3
P10809_1006
29.3
P10809_1024
32.0
P10809_1043
25.7
P10809_1062
34.4
P10809_1083
23.3
P10809_1097
23.8
Memory CD4 T-cell nTPM: 31.6
Samples: 6
Max nTPM: 35.4
Min nTPM: 28.6
P10809_1014
29.4
P10809_1026
34.9
P10809_1045
35.4
P10809_1064
28.6
P10809_1086
28.7
P10809_1113
32.8
Memory CD8 T-cell nTPM: 31.5
Samples: 5
Max nTPM: 39.3
Min nTPM: 27.9
P10809_1012
31.5
P10809_1027
30.3
P10809_1046
39.3
P10809_1065
27.9
P10809_1111
28.3
Naive CD4 T-cell nTPM: 25.5
Samples: 6
Max nTPM: 36.3
Min nTPM: 19.2
P10809_1015
19.2
P10809_1030
22.1
P10809_1049
36.3
P10809_1068
28.5
P10809_1085
22.4
P10809_1112
24.4
Naive CD8 T-cell nTPM: 24.9
Samples: 6
Max nTPM: 30.9
Min nTPM: 19.4
P10809_1016
22.4
P10809_1031
21.8
P10809_1050
25.4
P10809_1069
30.9
P10809_1087
29.3
P10809_1110
19.4
T-reg nTPM: 42.3
Samples: 6
Max nTPM: 53.5
Min nTPM: 34.7
P10809_1018
53.5
P10809_1037
36.3
P10809_1056
37.6
P10809_1075
44.3
P10809_1094
47.2
P10809_1106
34.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
211.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 172.4
Samples: 4
Max nTPM: 204.6
Min nTPM: 155.0
RHH5202_R3573
155.0
RHH5230_R3602
204.6
RHH5259_R3631
170.4
RHH5288_R3660
159.6
Effector memory CD8 T-cell nTPM: 172.1
Samples: 4
Max nTPM: 187.9
Min nTPM: 163.1
RHH5203_R3574
163.1
RHH5231_R3603
187.9
RHH5260_R3632
173.9
RHH5289_R3661
163.3
MAIT T-cell nTPM: 154.8
Samples: 4
Max nTPM: 193.6
Min nTPM: 101.1
RHH5233_R3605
176.4
RHH5205_R3576
193.6
RHH5262_R3634
101.1
RHH5297_R3663
148.2
Memory CD4 T-cell TFH nTPM: 181.0
Samples: 4
Max nTPM: 210.2
Min nTPM: 163.1
RHH5300_R3666
177.4
RHH5236_R3608
210.2
RHH5265_R3637
173.4
RHH5208_R3579
163.1
Memory CD4 T-cell Th1 nTPM: 171.0
Samples: 4
Max nTPM: 198.6
Min nTPM: 141.6
RHH5210_R3581
141.6
RHH5302_R3668
163.1
RHH5238_R3610
198.6
RHH5267_R3639
180.5
Memory CD4 T-cell Th1/Th17 nTPM: 191.9
Samples: 4
Max nTPM: 213.1
Min nTPM: 164.4
RHH5303_R3669
213.1
RHH5211_R3582
200.3
RHH5239_R3611
189.9
RHH5268_R3640
164.4
Memory CD4 T-cell Th17 nTPM: 211.6
Samples: 4
Max nTPM: 288.1
Min nTPM: 169.2
RHH5304_R3670
213.7
RHH5212_R3583
175.4
RHH5240_R3612
288.1
RHH5269_R3641
169.2
Memory CD4 T-cell Th2 nTPM: 166.8
Samples: 4
Max nTPM: 193.1
Min nTPM: 144.9
RHH5305_R3671
166.1
RHH5213_R3584
193.1
RHH5241_R3613
163.0
RHH5270_R3642
144.9
Naive CD4 T-cell nTPM: 165.7
Samples: 4
Max nTPM: 173.8
Min nTPM: 154.7
RHH5306_R3672
173.8
RHH5214_R3585
160.6
RHH5242_R3614
154.7
RHH5271_R3643
173.5
Naive CD8 T-cell nTPM: 169.3
Samples: 4
Max nTPM: 195.1
Min nTPM: 149.6
RHH5201_R3572
149.6
RHH5229_R3601
195.1
RHH5258_R3630
154.5
RHH5287_R3659
178.0
Non-Vd2 gdTCR nTPM: 150.1
Samples: 4
Max nTPM: 169.5
Min nTPM: 138.4
RHH5235_R3607
169.5
RHH5264_R3636
147.3
RHH5207_R3578
145.2
RHH5299_R3665
138.4
T-reg nTPM: 182.1
Samples: 4
Max nTPM: 244.6
Min nTPM: 145.2
RHH5301_R3667
145.2
RHH5237_R3609
244.6
RHH5266_R3638
159.7
RHH5209_R3580
178.7
Terminal effector memory CD4 T-cell nTPM: 157.9
Samples: 2
Max nTPM: 181.8
Min nTPM: 134.0
RHH5243_R3615
181.8
RHH5272_R3644
134.0
Terminal effector memory CD8 T-cell nTPM: 166.8
Samples: 4
Max nTPM: 196.1
Min nTPM: 115.4
RHH5232_R3604
179.3
RHH5204_R3575
115.4
RHH5261_R3633
176.4
RHH5296_R3662
196.1
Vd2 gdTCR nTPM: 151.7
Samples: 4
Max nTPM: 171.7
Min nTPM: 138.0
RHH5234_R3606
151.6
RHH5206_R3577
138.0
RHH5263_R3635
171.7
RHH5298_R3664
145.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.