We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
44.7
nTPM
Monaco:
75.9
nTPM
Schmiedel:
85.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
44.7
HPA sample
nTPM
gdT-cell nTPM: 35.9
Samples: 6
Max nTPM: 47.1
Min nTPM: 29.4
P10809_1007
33.5
P10809_1022
42.7
P10809_1041
47.1
P10809_1060
29.4
P10809_1077
30.1
P10809_1098
32.5
MAIT T-cell nTPM: 40.6
Samples: 6
Max nTPM: 54.3
Min nTPM: 33.2
P10809_1006
33.2
P10809_1024
38.9
P10809_1043
41.7
P10809_1062
36.5
P10809_1083
38.7
P10809_1097
54.3
Memory CD4 T-cell nTPM: 38.4
Samples: 6
Max nTPM: 57.5
Min nTPM: 27.4
P10809_1014
31.8
P10809_1026
57.5
P10809_1045
39.6
P10809_1064
42.3
P10809_1086
27.4
P10809_1113
31.9
Memory CD8 T-cell nTPM: 36.7
Samples: 5
Max nTPM: 49.0
Min nTPM: 30.1
P10809_1012
30.9
P10809_1027
36.6
P10809_1046
49.0
P10809_1065
37.1
P10809_1111
30.1
Naive CD4 T-cell nTPM: 34.0
Samples: 6
Max nTPM: 40.4
Min nTPM: 28.1
P10809_1015
28.1
P10809_1030
40.4
P10809_1049
39.1
P10809_1068
36.0
P10809_1085
32.3
P10809_1112
28.1
Naive CD8 T-cell nTPM: 33.3
Samples: 6
Max nTPM: 40.1
Min nTPM: 29.7
P10809_1016
31.6
P10809_1031
40.1
P10809_1050
36.0
P10809_1069
30.1
P10809_1087
29.7
P10809_1110
32.3
T-reg nTPM: 44.7
Samples: 6
Max nTPM: 64.0
Min nTPM: 33.1
P10809_1018
42.2
P10809_1037
36.7
P10809_1056
64.0
P10809_1075
46.7
P10809_1094
45.7
P10809_1106
33.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
75.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 58.3
Samples: 4
Max nTPM: 70.8
Min nTPM: 45.7
RHH5202_R3573
57.0
RHH5230_R3602
59.5
RHH5259_R3631
45.7
RHH5288_R3660
70.8
Effector memory CD8 T-cell nTPM: 75.9
Samples: 4
Max nTPM: 97.5
Min nTPM: 52.4
RHH5203_R3574
80.3
RHH5231_R3603
73.4
RHH5260_R3632
52.4
RHH5289_R3661
97.5
MAIT T-cell nTPM: 68.2
Samples: 4
Max nTPM: 75.6
Min nTPM: 60.7
RHH5233_R3605
68.6
RHH5205_R3576
60.7
RHH5262_R3634
75.6
RHH5297_R3663
67.8
Memory CD4 T-cell TFH nTPM: 73.3
Samples: 4
Max nTPM: 81.1
Min nTPM: 69.8
RHH5300_R3666
69.8
RHH5236_R3608
71.5
RHH5265_R3637
81.1
RHH5208_R3579
70.7
Memory CD4 T-cell Th1 nTPM: 49.8
Samples: 4
Max nTPM: 69.8
Min nTPM: 24.7
RHH5210_R3581
49.9
RHH5302_R3668
69.8
RHH5238_R3610
24.7
RHH5267_R3639
54.8
Memory CD4 T-cell Th1/Th17 nTPM: 61.1
Samples: 4
Max nTPM: 82.5
Min nTPM: 30.3
RHH5303_R3669
81.3
RHH5211_R3582
82.5
RHH5239_R3611
30.3
RHH5268_R3640
50.1
Memory CD4 T-cell Th17 nTPM: 56.8
Samples: 4
Max nTPM: 87.2
Min nTPM: 33.7
RHH5304_R3670
54.9
RHH5212_R3583
87.2
RHH5240_R3612
33.7
RHH5269_R3641
51.5
Memory CD4 T-cell Th2 nTPM: 71.2
Samples: 4
Max nTPM: 93.6
Min nTPM: 53.3
RHH5305_R3671
53.3
RHH5213_R3584
71.4
RHH5241_R3613
93.6
RHH5270_R3642
66.6
Naive CD4 T-cell nTPM: 69.8
Samples: 4
Max nTPM: 78.7
Min nTPM: 61.8
RHH5306_R3672
78.7
RHH5214_R3585
73.3
RHH5242_R3614
61.8
RHH5271_R3643
65.5
Naive CD8 T-cell nTPM: 59.5
Samples: 4
Max nTPM: 87.8
Min nTPM: 24.9
RHH5201_R3572
66.0
RHH5229_R3601
24.9
RHH5258_R3630
87.8
RHH5287_R3659
59.4
Non-Vd2 gdTCR nTPM: 72.8
Samples: 4
Max nTPM: 92.2
Min nTPM: 52.1
RHH5235_R3607
52.1
RHH5264_R3636
85.2
RHH5207_R3578
92.2
RHH5299_R3665
61.7
T-reg nTPM: 56.7
Samples: 4
Max nTPM: 69.0
Min nTPM: 40.6
RHH5301_R3667
69.0
RHH5237_R3609
52.5
RHH5266_R3638
40.6
RHH5209_R3580
64.6
Terminal effector memory CD4 T-cell nTPM: 64.1
Samples: 2
Max nTPM: 72.1
Min nTPM: 56.1
RHH5243_R3615
56.1
RHH5272_R3644
72.1
Terminal effector memory CD8 T-cell nTPM: 70.1
Samples: 4
Max nTPM: 91.3
Min nTPM: 58.1
RHH5232_R3604
58.1
RHH5204_R3575
72.7
RHH5261_R3633
58.4
RHH5296_R3662
91.3
Vd2 gdTCR nTPM: 65.9
Samples: 4
Max nTPM: 80.5
Min nTPM: 48.9
RHH5234_R3606
71.3
RHH5206_R3577
80.5
RHH5263_R3635
48.9
RHH5298_R3664
62.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
