HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:36.3 nTPM
HPA Brain:20.4 nTPM
GTEx:36.3 nTPM
FANTOM5:10.9 Scaled Tags Per Million
Pig:266.3 nTPM
Mouse:54.1 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.4
Sample id Sample description nTPM
Hippocampus
nTPM: 18.7
1855 Male, age 76, left hemisphere 24.2
1898 Male, age 80, left hemisphere 20.6
1911 Female, age 85, right hemisphere 19.2
2529 Female, age 94, left hemisphere 18.1
2148 Female, age 91, left hemisphere 15.5
2621 Female, age 67, right hemisphere 14.7
Dentate gyrus
nTPM: 16.4
2010 Male, age 76, both hemispheres 23.1
1927 Female, age 91, both hemispheres 17.2
2246 Female, age 85, both hemispheres 16.9
2528 Male, age 74, both hemispheres 15.4
2530 Female, age 94, left hemisphere 14.3
2531 Female, age 67, both hemispheres 11.5
Entorhinal gyrus
nTPM: 13.8
1938 Female, age 85, left hemisphere 18.2
2117 Female, age 91, right hemisphere 17.2
1787 Male, age 76, left hemisphere 15.5
2764 Male, age 80, right hemisphere 12.2
2686 Male, age 75, right hemisphere 11.0
2613 Female, age 94, left hemisphere 8.4
Hippocampus, CA1
nTPM: 20.4
2045 Male, age 76, both hemispheres 22.3
1873 Female, age 85, both hemispheres 21.3
2749 Male, age 80, left hemisphere 21.1
2527 Male, age 74, both hemispheres 20.4
2082 Female, age 91, right hemisphere 17.0
Hippocampus, CA2
nTPM: 18.0
2249 Male, age 74, both hemispheres 23.8
1892 Male, age 76, both hemispheres 21.0
1963 Male, age 80, left hemisphere 17.9
1940 Female, age 85, left hemisphere 16.1
2113 Female, age 91, right hemisphere 15.9
2437 Female, age 94, left hemisphere 13.3
Hippocampus, CA3
nTPM: 17.7
2137 Male, age 80, left hemisphere 22.3
2436 Male, age 74, both hemispheres 21.9
1867 Male, age 76, both hemispheres 21.4
1891 Female, age 85, both hemispheres 18.8
2861 Female, age 67, both hemispheres 11.2
2620 Female, age 94, left hemisphere 10.6
Parahippocampal cortex
nTPM: 15.4
2018 Male, age 76, both hemispheres 22.1
2250 Female, age 67, right hemisphere 20.5
1933 Female, age 85, both hemispheres 17.3
1850 Male, age 80, both hemispheres 16.1
2245 Female, age 91, both hemispheres 15.8
1990 Female, age 91, right hemisphere 14.6
2693 Female, age 94, both hemispheres 13.3
2532 Female, age 72, left hemisphere 13.2
2692 Male, age 74, both hemispheres 13.1
2622 Female, age 67, right hemisphere 8.0
Perirhinal gyrus
nTPM: 16.4
1847 Female, age 91, left hemisphere 18.5
1841 Female, age 85, right hemisphere 17.3
2521 Female, age 94, right hemisphere 16.8
1794 Male, age 80, right hemisphere 14.8
2848 Male, age 76, right hemisphere 14.5
Subiculum
nTPM: 16.0
2729 Female, age 91, right hemisphere 19.4
1977 Female, age 85, both hemispheres 18.2
1901 Male, age 80, both hemispheres 16.9
2042 Male, age 76, both hemispheres 15.8
2619 Male, age 74, both hemispheres 14.4
2438 Female, age 94, left hemisphere 11.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.3
Samples: 197

Max nTPM: 81.4
Min nTPM: 19.2
Std nTPM: 9.1
Median nTPM: 35.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 81.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 70.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 59.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 58.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 58.6
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 58.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 57.5
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 55.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 53.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 53.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 52.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.9
FF:10169-103B7 60 years, female 12.4
FF:10153-102I9 76 years, female 9.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 266.3
Pig sample Sample description nTPM
Subiculum
nTPM: 237.7
Samples: 4

Max nTPM: 289.6
Min nTPM: 201.8
Sample A Female 289.6
Sample B Female 206.3
Sample C Male 201.8
Sample D Male 253.2
Dorsal hippocampus
nTPM: 266.3
Samples: 4

Max nTPM: 356.1
Min nTPM: 203.7
Sample A Female 356.1
Sample B Female 212.1
Sample C Male 293.4
Sample D Male 203.7
Entorhinal cortex
nTPM: 222.8
Samples: 4

Max nTPM: 288.2
Min nTPM: 169.8
Sample A Female 169.8
Sample B Female 288.2
Sample C Male 242.9
Sample D Male 190.1
Ventral hippocampus
nTPM: 234.5
Samples: 4

Max nTPM: 288.0
Min nTPM: 192.4
Sample A Female 263.9
Sample B Female 193.7
Sample C Male 192.4
Sample D Male 288.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 54.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 52.5
Samples: 4

Max nTPM: 57.8
Min nTPM: 49.0
Sample A Male 51.3
Sample B Male 49.0
Sample C Female 57.8
Sample D Female 52.0
Hippocampal formation
nTPM: 54.1
Samples: 4

Max nTPM: 62.6
Min nTPM: 48.9
Sample A Male 62.6
Sample B Male 50.1
Sample C Female 54.8
Sample D Female 48.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
69202782 Antisense, RP_050324_04_D04, Mouse strain C57BL/6J (56 days, male) 3.1

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