HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:167.1 nTPM
HPA Brain:80.5 nTPM
GTEx:167.1 nTPM
FANTOM5:79.5 Scaled Tags Per Million
Mouse:153.1 nTPM
Allen mouse:12.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004801
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 80.5
Sample id Sample description nTPM
Hippocampus
nTPM: 69.1
1898 Male, age 80, left hemisphere 83.7
1855 Male, age 76, left hemisphere 73.1
2621 Female, age 67, right hemisphere 68.8
2148 Female, age 91, left hemisphere 65.0
1911 Female, age 85, right hemisphere 63.8
2529 Female, age 94, left hemisphere 60.2
Dentate gyrus
nTPM: 66.1
2010 Male, age 76, both hemispheres 75.0
2528 Male, age 74, both hemispheres 71.3
1927 Female, age 91, both hemispheres 68.8
2246 Female, age 85, both hemispheres 62.8
2530 Female, age 94, left hemisphere 62.3
2531 Female, age 67, both hemispheres 56.6
Entorhinal gyrus
nTPM: 63.3
1938 Female, age 85, left hemisphere 75.3
1787 Male, age 76, left hemisphere 70.8
2764 Male, age 80, right hemisphere 67.7
2686 Male, age 75, right hemisphere 65.0
2117 Female, age 91, right hemisphere 61.1
2613 Female, age 94, left hemisphere 39.8
Hippocampus, CA1
nTPM: 73.6
2749 Male, age 80, left hemisphere 96.1
2045 Male, age 76, both hemispheres 76.1
1873 Female, age 85, both hemispheres 74.2
2527 Male, age 74, both hemispheres 63.3
2082 Female, age 91, right hemisphere 58.4
Hippocampus, CA2
nTPM: 68.3
1892 Male, age 76, both hemispheres 80.5
2249 Male, age 74, both hemispheres 78.6
1963 Male, age 80, left hemisphere 74.9
1940 Female, age 85, left hemisphere 64.5
2113 Female, age 91, right hemisphere 56.9
2437 Female, age 94, left hemisphere 54.4
Hippocampus, CA3
nTPM: 68.2
2137 Male, age 80, left hemisphere 80.5
2436 Male, age 74, both hemispheres 79.0
1867 Male, age 76, both hemispheres 77.0
1891 Female, age 85, both hemispheres 71.5
2620 Female, age 94, left hemisphere 51.7
2861 Female, age 67, both hemispheres 49.6
Parahippocampal cortex
nTPM: 67.1
1850 Male, age 80, both hemispheres 77.5
1933 Female, age 85, both hemispheres 76.1
2018 Male, age 76, both hemispheres 75.6
2250 Female, age 67, right hemisphere 66.9
1990 Female, age 91, right hemisphere 66.5
2693 Female, age 94, both hemispheres 65.7
2245 Female, age 91, both hemispheres 65.6
2692 Male, age 74, both hemispheres 62.9
2532 Female, age 72, left hemisphere 62.6
2622 Female, age 67, right hemisphere 52.0
Perirhinal gyrus
nTPM: 80.5
1841 Female, age 85, right hemisphere 90.3
1794 Male, age 80, right hemisphere 89.1
1847 Female, age 91, left hemisphere 84.1
2521 Female, age 94, right hemisphere 70.0
2848 Male, age 76, right hemisphere 69.1
Subiculum
nTPM: 66.4
1977 Female, age 85, both hemispheres 78.0
2042 Male, age 76, both hemispheres 73.0
1901 Male, age 80, both hemispheres 67.3
2619 Male, age 74, both hemispheres 64.7
2729 Female, age 91, right hemisphere 61.5
2438 Female, age 94, left hemisphere 53.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 167.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 167.1
Samples: 197

Max nTPM: 383.0
Min nTPM: 100.0
Std nTPM: 38.7
Median nTPM: 161.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 383.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 315.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 288.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 274.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 271.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 264.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 263.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 255.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 248.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 248.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 245.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 79.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 79.5
FF:10169-103B7 60 years, female 82.0
FF:10153-102I9 76 years, female 77.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 153.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 142.3
Samples: 4

Max nTPM: 145.2
Min nTPM: 136.0
Sample A Male 136.0
Sample B Male 143.0
Sample C Female 145.2
Sample D Female 145.1
Hippocampal formation
nTPM: 153.1
Samples: 4

Max nTPM: 161.6
Min nTPM: 136.4
Sample A Male 161.6
Sample B Male 136.4
Sample C Female 160.7
Sample D Female 153.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.5
678717 Antisense, RP_040914_02_G10, Mouse strain C57BL/6J (56 days, male) 12.5

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