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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
330.4
nTPM
Monaco:
114.2
nTPM
Schmiedel:
0.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
330.4
HPA sample
nTPM
gdT-cell nTPM: 292.5
Samples: 6
Max nTPM: 402.2
Min nTPM: 248.7
P10809_1007
249.9
P10809_1022
284.9
P10809_1041
402.2
P10809_1060
248.7
P10809_1077
284.6
P10809_1098
284.7
MAIT T-cell nTPM: 284.4
Samples: 6
Max nTPM: 328.4
Min nTPM: 205.5
P10809_1006
205.5
P10809_1024
328.4
P10809_1043
321.1
P10809_1062
261.4
P10809_1083
294.4
P10809_1097
295.3
Memory CD4 T-cell nTPM: 295.4
Samples: 6
Max nTPM: 329.4
Min nTPM: 259.7
P10809_1014
259.7
P10809_1026
329.4
P10809_1045
319.0
P10809_1064
268.0
P10809_1086
283.9
P10809_1113
312.1
Memory CD8 T-cell nTPM: 291.3
Samples: 5
Max nTPM: 336.7
Min nTPM: 223.2
P10809_1012
223.2
P10809_1027
336.7
P10809_1046
307.9
P10809_1065
302.7
P10809_1111
286.0
Naive CD4 T-cell nTPM: 330.4
Samples: 6
Max nTPM: 422.4
Min nTPM: 270.1
P10809_1015
270.1
P10809_1030
399.1
P10809_1049
422.4
P10809_1068
302.6
P10809_1085
271.9
P10809_1112
316.5
Naive CD8 T-cell nTPM: 325.2
Samples: 6
Max nTPM: 378.6
Min nTPM: 292.9
P10809_1016
334.9
P10809_1031
378.6
P10809_1050
326.9
P10809_1069
323.3
P10809_1087
292.9
P10809_1110
294.6
T-reg nTPM: 304.3
Samples: 6
Max nTPM: 378.9
Min nTPM: 213.9
P10809_1018
213.9
P10809_1037
378.9
P10809_1056
279.3
P10809_1075
310.9
P10809_1094
292.7
P10809_1106
350.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
114.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 74.0
Samples: 4
Max nTPM: 98.2
Min nTPM: 60.6
RHH5202_R3573
60.6
RHH5230_R3602
62.4
RHH5259_R3631
98.2
RHH5288_R3660
74.8
Effector memory CD8 T-cell nTPM: 61.4
Samples: 4
Max nTPM: 73.4
Min nTPM: 49.1
RHH5203_R3574
71.3
RHH5231_R3603
51.9
RHH5260_R3632
73.4
RHH5289_R3661
49.1
MAIT T-cell nTPM: 73.2
Samples: 4
Max nTPM: 88.7
Min nTPM: 63.2
RHH5233_R3605
71.5
RHH5205_R3576
88.7
RHH5262_R3634
63.2
RHH5297_R3663
69.5
Memory CD4 T-cell TFH nTPM: 70.7
Samples: 4
Max nTPM: 90.1
Min nTPM: 50.0
RHH5300_R3666
68.5
RHH5236_R3608
90.1
RHH5265_R3637
50.0
RHH5208_R3579
74.1
Memory CD4 T-cell Th1 nTPM: 103.1
Samples: 4
Max nTPM: 143.7
Min nTPM: 61.5
RHH5210_R3581
61.5
RHH5302_R3668
106.1
RHH5238_R3610
143.7
RHH5267_R3639
100.9
Memory CD4 T-cell Th1/Th17 nTPM: 80.5
Samples: 4
Max nTPM: 100.8
Min nTPM: 60.2
RHH5303_R3669
83.4
RHH5211_R3582
60.2
RHH5239_R3611
77.5
RHH5268_R3640
100.8
Memory CD4 T-cell Th17 nTPM: 67.9
Samples: 4
Max nTPM: 90.5
Min nTPM: 51.3
RHH5304_R3670
90.5
RHH5212_R3583
64.1
RHH5240_R3612
65.8
RHH5269_R3641
51.3
Memory CD4 T-cell Th2 nTPM: 78.5
Samples: 4
Max nTPM: 109.1
Min nTPM: 66.1
RHH5305_R3671
109.1
RHH5213_R3584
66.1
RHH5241_R3613
71.8
RHH5270_R3642
67.0
Naive CD4 T-cell nTPM: 90.5
Samples: 4
Max nTPM: 108.1
Min nTPM: 65.2
RHH5306_R3672
108.1
RHH5214_R3585
103.7
RHH5242_R3614
85.1
RHH5271_R3643
65.2
Naive CD8 T-cell nTPM: 98.5
Samples: 4
Max nTPM: 119.4
Min nTPM: 82.9
RHH5201_R3572
82.9
RHH5229_R3601
94.5
RHH5258_R3630
97.1
RHH5287_R3659
119.4
Non-Vd2 gdTCR nTPM: 83.5
Samples: 4
Max nTPM: 97.9
Min nTPM: 72.0
RHH5235_R3607
76.8
RHH5264_R3636
72.0
RHH5207_R3578
97.9
RHH5299_R3665
87.4
T-reg nTPM: 73.0
Samples: 4
Max nTPM: 88.4
Min nTPM: 49.8
RHH5301_R3667
83.9
RHH5237_R3609
49.8
RHH5266_R3638
69.9
RHH5209_R3580
88.4
Terminal effector memory CD4 T-cell nTPM: 62.3
Samples: 2
Max nTPM: 63.9
Min nTPM: 60.7
RHH5243_R3615
63.9
RHH5272_R3644
60.7
Terminal effector memory CD8 T-cell nTPM: 114.2
Samples: 4
Max nTPM: 193.5
Min nTPM: 70.0
RHH5232_R3604
70.0
RHH5204_R3575
193.5
RHH5261_R3633
111.0
RHH5296_R3662
82.4
Vd2 gdTCR nTPM: 107.5
Samples: 4
Max nTPM: 146.6
Min nTPM: 86.3
RHH5234_R3606
86.3
RHH5206_R3577
146.6
RHH5263_R3635
88.5
RHH5298_R3664
108.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
