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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
18.8
nTPM
Monaco:
12.8
nTPM
Schmiedel:
36.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
18.8
HPA sample
nTPM
gdT-cell nTPM: 13.6
Samples: 6
Max nTPM: 23.0
Min nTPM: 9.1
P10809_1007
9.4
P10809_1022
13.9
P10809_1041
23.0
P10809_1060
12.7
P10809_1077
9.1
P10809_1098
13.6
MAIT T-cell nTPM: 14.6
Samples: 6
Max nTPM: 21.1
Min nTPM: 7.1
P10809_1006
7.1
P10809_1024
20.1
P10809_1043
20.0
P10809_1062
12.0
P10809_1083
7.1
P10809_1097
21.1
Memory CD4 T-cell nTPM: 15.9
Samples: 6
Max nTPM: 21.8
Min nTPM: 10.8
P10809_1014
10.8
P10809_1026
21.8
P10809_1045
17.4
P10809_1064
14.7
P10809_1086
12.6
P10809_1113
17.9
Memory CD8 T-cell nTPM: 13.0
Samples: 5
Max nTPM: 21.6
Min nTPM: 7.5
P10809_1012
7.5
P10809_1027
9.2
P10809_1046
21.6
P10809_1065
10.3
P10809_1111
16.6
Naive CD4 T-cell nTPM: 18.8
Samples: 6
Max nTPM: 24.6
Min nTPM: 11.2
P10809_1015
11.2
P10809_1030
24.6
P10809_1049
22.9
P10809_1068
20.5
P10809_1085
14.0
P10809_1112
19.5
Naive CD8 T-cell nTPM: 18.0
Samples: 6
Max nTPM: 21.7
Min nTPM: 11.4
P10809_1016
13.8
P10809_1031
21.7
P10809_1050
21.7
P10809_1069
18.7
P10809_1087
11.4
P10809_1110
20.5
T-reg nTPM: 12.7
Samples: 6
Max nTPM: 30.5
Min nTPM: 6.0
P10809_1018
6.8
P10809_1037
10.7
P10809_1056
6.0
P10809_1075
30.5
P10809_1094
8.7
P10809_1106
13.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
12.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 11.0
Samples: 4
Max nTPM: 16.5
Min nTPM: 5.1
RHH5202_R3573
9.7
RHH5230_R3602
5.1
RHH5259_R3631
12.8
RHH5288_R3660
16.5
Effector memory CD8 T-cell nTPM: 6.0
Samples: 4
Max nTPM: 7.8
Min nTPM: 1.8
RHH5203_R3574
7.8
RHH5231_R3603
7.1
RHH5260_R3632
7.4
RHH5289_R3661
1.8
MAIT T-cell nTPM: 3.5
Samples: 4
Max nTPM: 6.0
Min nTPM: 0.0
RHH5233_R3605
6.0
RHH5205_R3576
1.8
RHH5262_R3634
6.0
RHH5297_R3663
0.0
Memory CD4 T-cell TFH nTPM: 12.8
Samples: 4
Max nTPM: 18.6
Min nTPM: 6.6
RHH5300_R3666
17.9
RHH5236_R3608
8.1
RHH5265_R3637
18.6
RHH5208_R3579
6.6
Memory CD4 T-cell Th1 nTPM: 11.0
Samples: 4
Max nTPM: 20.3
Min nTPM: 5.0
RHH5210_R3581
20.3
RHH5302_R3668
7.9
RHH5238_R3610
5.0
RHH5267_R3639
10.6
Memory CD4 T-cell Th1/Th17 nTPM: 7.6
Samples: 4
Max nTPM: 12.1
Min nTPM: 3.9
RHH5303_R3669
9.0
RHH5211_R3582
5.5
RHH5239_R3611
3.9
RHH5268_R3640
12.1
Memory CD4 T-cell Th17 nTPM: 7.2
Samples: 4
Max nTPM: 11.2
Min nTPM: 4.5
RHH5304_R3670
11.2
RHH5212_R3583
7.6
RHH5240_R3612
5.6
RHH5269_R3641
4.5
Memory CD4 T-cell Th2 nTPM: 6.5
Samples: 4
Max nTPM: 11.7
Min nTPM: 3.1
RHH5305_R3671
3.7
RHH5213_R3584
11.7
RHH5241_R3613
3.1
RHH5270_R3642
7.5
Naive CD4 T-cell nTPM: 10.0
Samples: 4
Max nTPM: 18.6
Min nTPM: 2.8
RHH5306_R3672
2.8
RHH5214_R3585
18.6
RHH5242_R3614
6.2
RHH5271_R3643
12.3
Naive CD8 T-cell nTPM: 11.7
Samples: 4
Max nTPM: 16.1
Min nTPM: 7.0
RHH5201_R3572
11.5
RHH5229_R3601
7.0
RHH5258_R3630
16.1
RHH5287_R3659
12.1
Non-Vd2 gdTCR nTPM: 7.9
Samples: 4
Max nTPM: 15.1
Min nTPM: 2.5
RHH5235_R3607
7.0
RHH5264_R3636
15.1
RHH5207_R3578
2.5
RHH5299_R3665
6.8
T-reg nTPM: 9.1
Samples: 4
Max nTPM: 12.5
Min nTPM: 5.5
RHH5301_R3667
12.5
RHH5237_R3609
5.5
RHH5266_R3638
8.1
RHH5209_R3580
10.1
Terminal effector memory CD4 T-cell nTPM: 5.8
Samples: 2
Max nTPM: 6.2
Min nTPM: 5.3
RHH5243_R3615
6.2
RHH5272_R3644
5.3
Terminal effector memory CD8 T-cell nTPM: 6.3
Samples: 4
Max nTPM: 12.9
Min nTPM: 1.6
RHH5232_R3604
1.6
RHH5204_R3575
5.3
RHH5261_R3633
12.9
RHH5296_R3662
5.3
Vd2 gdTCR nTPM: 10.8
Samples: 4
Max nTPM: 15.5
Min nTPM: 6.7
RHH5234_R3606
6.7
RHH5206_R3577
13.0
RHH5263_R3635
8.0
RHH5298_R3664
15.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
