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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
124.0
nTPM
Monaco:
185.6
nTPM
Schmiedel:
328.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
124.0
HPA sample
nTPM
gdT-cell nTPM: 84.4
Samples: 6
Max nTPM: 100.9
Min nTPM: 64.3
P10809_1007
87.2
P10809_1022
100.9
P10809_1041
95.3
P10809_1060
64.3
P10809_1077
75.9
P10809_1098
82.9
MAIT T-cell nTPM: 104.0
Samples: 6
Max nTPM: 157.0
Min nTPM: 63.6
P10809_1006
89.9
P10809_1024
114.6
P10809_1043
107.7
P10809_1062
91.4
P10809_1083
63.6
P10809_1097
157.0
Memory CD4 T-cell nTPM: 96.5
Samples: 6
Max nTPM: 114.0
Min nTPM: 77.8
P10809_1014
103.7
P10809_1026
104.0
P10809_1045
114.0
P10809_1064
84.5
P10809_1086
77.8
P10809_1113
94.8
Memory CD8 T-cell nTPM: 98.1
Samples: 5
Max nTPM: 123.5
Min nTPM: 76.9
P10809_1012
106.4
P10809_1027
79.7
P10809_1046
104.2
P10809_1065
76.9
P10809_1111
123.5
Naive CD4 T-cell nTPM: 85.4
Samples: 6
Max nTPM: 109.0
Min nTPM: 68.8
P10809_1015
87.0
P10809_1030
84.5
P10809_1049
109.0
P10809_1068
68.8
P10809_1085
77.8
P10809_1112
85.2
Naive CD8 T-cell nTPM: 85.4
Samples: 6
Max nTPM: 101.2
Min nTPM: 59.3
P10809_1016
101.2
P10809_1031
59.3
P10809_1050
98.1
P10809_1069
84.0
P10809_1087
72.9
P10809_1110
96.7
T-reg nTPM: 124.0
Samples: 6
Max nTPM: 135.0
Min nTPM: 109.4
P10809_1018
128.7
P10809_1037
115.3
P10809_1056
109.4
P10809_1075
126.2
P10809_1094
135.0
P10809_1106
129.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
185.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 135.4
Samples: 4
Max nTPM: 175.7
Min nTPM: 75.3
RHH5202_R3573
175.7
RHH5230_R3602
118.1
RHH5259_R3631
75.3
RHH5288_R3660
172.3
Effector memory CD8 T-cell nTPM: 146.5
Samples: 4
Max nTPM: 226.2
Min nTPM: 87.0
RHH5203_R3574
226.2
RHH5231_R3603
143.3
RHH5260_R3632
87.0
RHH5289_R3661
129.3
MAIT T-cell nTPM: 173.5
Samples: 4
Max nTPM: 223.6
Min nTPM: 102.7
RHH5233_R3605
223.6
RHH5205_R3576
102.7
RHH5262_R3634
150.9
RHH5297_R3663
216.8
Memory CD4 T-cell TFH nTPM: 138.1
Samples: 4
Max nTPM: 183.6
Min nTPM: 100.7
RHH5300_R3666
183.6
RHH5236_R3608
100.7
RHH5265_R3637
145.5
RHH5208_R3579
122.4
Memory CD4 T-cell Th1 nTPM: 136.9
Samples: 4
Max nTPM: 194.3
Min nTPM: 85.4
RHH5210_R3581
156.8
RHH5302_R3668
194.3
RHH5238_R3610
85.4
RHH5267_R3639
111.2
Memory CD4 T-cell Th1/Th17 nTPM: 139.1
Samples: 4
Max nTPM: 204.7
Min nTPM: 76.1
RHH5303_R3669
204.7
RHH5211_R3582
173.9
RHH5239_R3611
76.1
RHH5268_R3640
101.7
Memory CD4 T-cell Th17 nTPM: 121.8
Samples: 4
Max nTPM: 181.8
Min nTPM: 65.3
RHH5304_R3670
145.0
RHH5212_R3583
181.8
RHH5240_R3612
65.3
RHH5269_R3641
95.2
Memory CD4 T-cell Th2 nTPM: 185.6
Samples: 4
Max nTPM: 218.9
Min nTPM: 157.1
RHH5305_R3671
195.7
RHH5213_R3584
170.5
RHH5241_R3613
218.9
RHH5270_R3642
157.1
Naive CD4 T-cell nTPM: 140.1
Samples: 4
Max nTPM: 171.7
Min nTPM: 123.7
RHH5306_R3672
171.7
RHH5214_R3585
139.3
RHH5242_R3614
123.7
RHH5271_R3643
125.7
Naive CD8 T-cell nTPM: 132.4
Samples: 4
Max nTPM: 168.0
Min nTPM: 59.5
RHH5201_R3572
168.0
RHH5229_R3601
59.5
RHH5258_R3630
157.5
RHH5287_R3659
144.7
Non-Vd2 gdTCR nTPM: 143.5
Samples: 4
Max nTPM: 171.9
Min nTPM: 104.3
RHH5235_R3607
104.3
RHH5264_R3636
171.9
RHH5207_R3578
147.1
RHH5299_R3665
150.7
T-reg nTPM: 134.6
Samples: 4
Max nTPM: 202.0
Min nTPM: 94.4
RHH5301_R3667
202.0
RHH5237_R3609
145.0
RHH5266_R3638
94.4
RHH5209_R3580
97.1
Terminal effector memory CD4 T-cell nTPM: 122.9
Samples: 2
Max nTPM: 144.4
Min nTPM: 101.4
RHH5243_R3615
101.4
RHH5272_R3644
144.4
Terminal effector memory CD8 T-cell nTPM: 139.7
Samples: 4
Max nTPM: 162.0
Min nTPM: 94.0
RHH5232_R3604
154.6
RHH5204_R3575
162.0
RHH5261_R3633
94.0
RHH5296_R3662
148.2
Vd2 gdTCR nTPM: 140.8
Samples: 4
Max nTPM: 193.9
Min nTPM: 83.1
RHH5234_R3606
141.2
RHH5206_R3577
145.0
RHH5263_R3635
83.1
RHH5298_R3664
193.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
