HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:11.5 nTPM
HPA Brain:28.2 nTPM
GTEx:11.5 nTPM
FANTOM5:62.9 Scaled Tags Per Million
Pig:29.6 nTPM
Mouse:17.5 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045278
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.2
Sample id Sample description nTPM
Hippocampus
nTPM: 25.3
1855 Male, age 76, left hemisphere 29.7
1898 Male, age 80, left hemisphere 28.6
1911 Female, age 85, right hemisphere 26.5
2621 Female, age 67, right hemisphere 24.2
2148 Female, age 91, left hemisphere 23.2
2529 Female, age 94, left hemisphere 19.5
Dentate gyrus
nTPM: 25.2
2246 Female, age 85, both hemispheres 30.5
2010 Male, age 76, both hemispheres 29.7
1927 Female, age 91, both hemispheres 29.1
2531 Female, age 67, both hemispheres 23.4
2528 Male, age 74, both hemispheres 21.1
2530 Female, age 94, left hemisphere 17.5
Entorhinal gyrus
nTPM: 23.3
1938 Female, age 85, left hemisphere 29.4
1787 Male, age 76, left hemisphere 25.5
2613 Female, age 94, left hemisphere 23.1
2117 Female, age 91, right hemisphere 22.1
2764 Male, age 80, right hemisphere 21.0
2686 Male, age 75, right hemisphere 19.0
Hippocampus, CA1
nTPM: 27.4
2749 Male, age 80, left hemisphere 36.5
1873 Female, age 85, both hemispheres 28.7
2045 Male, age 76, both hemispheres 27.8
2527 Male, age 74, both hemispheres 22.7
2082 Female, age 91, right hemisphere 21.1
Hippocampus, CA2
nTPM: 23.9
1892 Male, age 76, both hemispheres 27.8
1963 Male, age 80, left hemisphere 26.6
1940 Female, age 85, left hemisphere 25.6
2113 Female, age 91, right hemisphere 22.5
2249 Male, age 74, both hemispheres 21.1
2437 Female, age 94, left hemisphere 20.1
Hippocampus, CA3
nTPM: 25.7
2137 Male, age 80, left hemisphere 31.8
2620 Female, age 94, left hemisphere 26.8
1867 Male, age 76, both hemispheres 26.1
1891 Female, age 85, both hemispheres 24.9
2436 Male, age 74, both hemispheres 23.6
2861 Female, age 67, both hemispheres 20.8
Parahippocampal cortex
nTPM: 25.8
1850 Male, age 80, both hemispheres 30.6
2693 Female, age 94, both hemispheres 29.9
1933 Female, age 85, both hemispheres 26.2
2018 Male, age 76, both hemispheres 26.2
2250 Female, age 67, right hemisphere 26.0
1990 Female, age 91, right hemisphere 25.3
2532 Female, age 72, left hemisphere 24.7
2245 Female, age 91, both hemispheres 23.9
2692 Male, age 74, both hemispheres 23.9
2622 Female, age 67, right hemisphere 21.2
Perirhinal gyrus
nTPM: 28.2
1841 Female, age 85, right hemisphere 31.9
1847 Female, age 91, left hemisphere 28.9
2521 Female, age 94, right hemisphere 27.6
2848 Male, age 76, right hemisphere 26.6
1794 Male, age 80, right hemisphere 25.9
Subiculum
nTPM: 23.0
1977 Female, age 85, both hemispheres 24.6
2042 Male, age 76, both hemispheres 24.2
2729 Female, age 91, right hemisphere 24.2
1901 Male, age 80, both hemispheres 24.1
2619 Male, age 74, both hemispheres 20.5
2438 Female, age 94, left hemisphere 20.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.5
Samples: 197

Max nTPM: 17.8
Min nTPM: 5.9
Std nTPM: 2.2
Median nTPM: 11.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 17.8
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 17.7
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 17.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 17.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 16.6
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 16.4
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 16.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 16.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 16.0
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 15.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 15.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.9
FF:10169-103B7 60 years, female 85.1
FF:10153-102I9 76 years, female 40.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.6
Pig sample Sample description nTPM
Subiculum
nTPM: 20.5
Samples: 4

Max nTPM: 22.4
Min nTPM: 18.0
Sample A Female 20.7
Sample B Female 20.7
Sample C Male 22.4
Sample D Male 18.0
Dorsal hippocampus
nTPM: 29.6
Samples: 4

Max nTPM: 36.7
Min nTPM: 23.5
Sample A Female 29.9
Sample B Female 36.7
Sample C Male 23.5
Sample D Male 28.3
Entorhinal cortex
nTPM: 26.8
Samples: 4

Max nTPM: 29.2
Min nTPM: 21.5
Sample A Female 21.5
Sample B Female 29.2
Sample C Male 28.5
Sample D Male 27.9
Ventral hippocampus
nTPM: 27.9
Samples: 4

Max nTPM: 41.6
Min nTPM: 18.8
Sample A Female 18.8
Sample B Female 23.1
Sample C Male 28.1
Sample D Male 41.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.9
Samples: 4

Max nTPM: 17.1
Min nTPM: 14.9
Sample A Male 14.9
Sample B Male 15.4
Sample C Female 16.3
Sample D Female 17.1
Hippocampal formation
nTPM: 17.5
Samples: 4

Max nTPM: 20.0
Min nTPM: 15.4
Sample A Male 16.5
Sample B Male 18.1
Sample C Female 20.0
Sample D Female 15.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
69407433 Antisense, RP_050414_01_F07, Mouse strain C57BL/6J (56 days, male) 0.8

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