HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:24.2 nTPM
HPA Brain:20.6 nTPM
GTEx:24.2 nTPM
FANTOM5:5.1 Scaled Tags Per Million
Pig:8.1 nTPM
Mouse:4.8 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036356Antibody CAB004986Antibody CAB017025
Glial cells MediumMediumNot detected
Neuronal cells Not detectedLowLow






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.6
Sample id Sample description nTPM
Hippocampus
nTPM: 19.3
2148 Female, age 91, left hemisphere 24.9
2529 Female, age 94, left hemisphere 20.7
1911 Female, age 85, right hemisphere 20.2
2621 Female, age 67, right hemisphere 18.9
1855 Male, age 76, left hemisphere 15.7
1898 Male, age 80, left hemisphere 15.3
Dentate gyrus
nTPM: 20.6
2531 Female, age 67, both hemispheres 31.7
2528 Male, age 74, both hemispheres 21.6
2246 Female, age 85, both hemispheres 19.6
1927 Female, age 91, both hemispheres 19.1
2530 Female, age 94, left hemisphere 16.2
2010 Male, age 76, both hemispheres 15.3
Entorhinal gyrus
nTPM: 15.8
2117 Female, age 91, right hemisphere 19.3
2764 Male, age 80, right hemisphere 17.5
2686 Male, age 75, right hemisphere 16.6
1787 Male, age 76, left hemisphere 14.1
2613 Female, age 94, left hemisphere 14.0
1938 Female, age 85, left hemisphere 13.2
Hippocampus, CA1
nTPM: 18.0
2082 Female, age 91, right hemisphere 23.2
2045 Male, age 76, both hemispheres 19.8
2527 Male, age 74, both hemispheres 19.6
1873 Female, age 85, both hemispheres 15.4
2749 Male, age 80, left hemisphere 12.0
Hippocampus, CA2
nTPM: 17.1
2113 Female, age 91, right hemisphere 22.0
2249 Male, age 74, both hemispheres 20.7
1940 Female, age 85, left hemisphere 19.3
2437 Female, age 94, left hemisphere 15.3
1963 Male, age 80, left hemisphere 14.9
1892 Male, age 76, both hemispheres 10.5
Hippocampus, CA3
nTPM: 19.2
2861 Female, age 67, both hemispheres 28.6
2436 Male, age 74, both hemispheres 20.0
2620 Female, age 94, left hemisphere 19.2
1891 Female, age 85, both hemispheres 17.4
1867 Male, age 76, both hemispheres 15.4
2137 Male, age 80, left hemisphere 14.5
Parahippocampal cortex
nTPM: 15.8
2622 Female, age 67, right hemisphere 22.8
2692 Male, age 74, both hemispheres 17.1
2245 Female, age 91, both hemispheres 16.6
1990 Female, age 91, right hemisphere 16.1
2532 Female, age 72, left hemisphere 16.1
2250 Female, age 67, right hemisphere 15.5
1933 Female, age 85, both hemispheres 14.4
2018 Male, age 76, both hemispheres 14.2
2693 Female, age 94, both hemispheres 13.0
1850 Male, age 80, both hemispheres 12.2
Perirhinal gyrus
nTPM: 13.7
2521 Female, age 94, right hemisphere 16.3
1794 Male, age 80, right hemisphere 14.1
2848 Male, age 76, right hemisphere 13.3
1847 Female, age 91, left hemisphere 13.1
1841 Female, age 85, right hemisphere 11.8
Subiculum
nTPM: 16.2
2729 Female, age 91, right hemisphere 23.8
2619 Male, age 74, both hemispheres 16.4
2042 Male, age 76, both hemispheres 16.1
1977 Female, age 85, both hemispheres 14.4
1901 Male, age 80, both hemispheres 14.2
2438 Female, age 94, left hemisphere 12.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.2
Samples: 197

Max nTPM: 79.2
Min nTPM: 8.2
Std nTPM: 9.8
Median nTPM: 21.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 79.2
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 65.9
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 55.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 53.4
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 52.4
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 51.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 50.7
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 46.2
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 44.7
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 43.7
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 42.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 5.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 5.1
FF:10153-102I9 76 years, female 10.3
FF:10169-103B7 60 years, female 0.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.1
Pig sample Sample description nTPM
Subiculum
nTPM: 6.9
Samples: 4

Max nTPM: 9.1
Min nTPM: 5.3
Sample A Female 9.1
Sample B Female 7.2
Sample C Male 6.1
Sample D Male 5.3
Dorsal hippocampus
nTPM: 7.6
Samples: 4

Max nTPM: 9.6
Min nTPM: 5.4
Sample A Female 9.6
Sample B Female 6.9
Sample C Male 8.6
Sample D Male 5.4
Entorhinal cortex
nTPM: 5.9
Samples: 4

Max nTPM: 6.9
Min nTPM: 5.1
Sample A Female 5.9
Sample B Female 5.6
Sample C Male 6.9
Sample D Male 5.1
Ventral hippocampus
nTPM: 8.0
Samples: 4

Max nTPM: 9.5
Min nTPM: 6.7
Sample A Female 8.7
Sample B Female 6.7
Sample C Male 9.5
Sample D Male 7.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 4.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.8
Samples: 4

Max nTPM: 5.1
Min nTPM: 4.1
Sample A Male 4.9
Sample B Male 5.1
Sample C Female 5.1
Sample D Female 4.1
Hippocampal formation
nTPM: 4.8
Samples: 4

Max nTPM: 5.9
Min nTPM: 4.1
Sample A Male 4.2
Sample B Male 4.1
Sample C Female 4.8
Sample D Female 5.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
69782342 Antisense, RP_050505_02_G07, Mouse strain C57BL/6J (56 days, male) 0.2

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