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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
41.7
nTPM
Monaco:
17.8
nTPM
Schmiedel:
1.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
41.7
HPA sample
nTPM
gdT-cell nTPM: 40.9
Samples: 6
Max nTPM: 79.1
Min nTPM: 25.2
P10809_1007
31.1
P10809_1022
79.1
P10809_1041
35.3
P10809_1060
27.8
P10809_1077
46.9
P10809_1098
25.2
MAIT T-cell nTPM: 38.8
Samples: 6
Max nTPM: 83.3
Min nTPM: 18.2
P10809_1006
18.2
P10809_1024
83.3
P10809_1043
28.5
P10809_1062
21.8
P10809_1083
54.1
P10809_1097
27.1
Memory CD4 T-cell nTPM: 28.6
Samples: 6
Max nTPM: 44.7
Min nTPM: 19.5
P10809_1014
22.6
P10809_1026
19.5
P10809_1045
20.7
P10809_1064
25.8
P10809_1086
44.7
P10809_1113
38.0
Memory CD8 T-cell nTPM: 31.1
Samples: 5
Max nTPM: 49.3
Min nTPM: 21.0
P10809_1012
33.7
P10809_1027
28.7
P10809_1046
21.0
P10809_1065
22.8
P10809_1111
49.3
Naive CD4 T-cell nTPM: 19.7
Samples: 6
Max nTPM: 27.9
Min nTPM: 7.7
P10809_1015
7.7
P10809_1030
21.3
P10809_1049
21.1
P10809_1068
12.7
P10809_1085
27.9
P10809_1112
27.5
Naive CD8 T-cell nTPM: 24.4
Samples: 6
Max nTPM: 38.7
Min nTPM: 8.7
P10809_1016
8.7
P10809_1031
36.5
P10809_1050
21.1
P10809_1069
15.5
P10809_1087
38.7
P10809_1110
25.6
T-reg nTPM: 41.7
Samples: 6
Max nTPM: 69.0
Min nTPM: 7.4
P10809_1018
57.4
P10809_1037
30.1
P10809_1056
7.4
P10809_1075
26.1
P10809_1094
60.1
P10809_1106
69.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
17.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 3.7
Samples: 4
Max nTPM: 6.3
Min nTPM: 1.6
RHH5202_R3573
4.7
RHH5230_R3602
2.2
RHH5259_R3631
1.6
RHH5288_R3660
6.3
Effector memory CD8 T-cell nTPM: 12.8
Samples: 4
Max nTPM: 20.4
Min nTPM: 8.4
RHH5203_R3574
20.4
RHH5231_R3603
11.6
RHH5260_R3632
10.8
RHH5289_R3661
8.4
MAIT T-cell nTPM: 4.2
Samples: 4
Max nTPM: 5.7
Min nTPM: 0.9
RHH5233_R3605
5.7
RHH5205_R3576
5.5
RHH5262_R3634
0.9
RHH5297_R3663
4.7
Memory CD4 T-cell TFH nTPM: 6.0
Samples: 4
Max nTPM: 10.1
Min nTPM: 2.3
RHH5300_R3666
2.3
RHH5236_R3608
7.5
RHH5265_R3637
3.9
RHH5208_R3579
10.1
Memory CD4 T-cell Th1 nTPM: 11.1
Samples: 4
Max nTPM: 17.4
Min nTPM: 5.4
RHH5210_R3581
11.3
RHH5302_R3668
17.4
RHH5238_R3610
10.4
RHH5267_R3639
5.4
Memory CD4 T-cell Th1/Th17 nTPM: 7.8
Samples: 4
Max nTPM: 17.7
Min nTPM: 3.2
RHH5303_R3669
17.7
RHH5211_R3582
3.2
RHH5239_R3611
5.1
RHH5268_R3640
5.1
Memory CD4 T-cell Th17 nTPM: 3.9
Samples: 4
Max nTPM: 8.5
Min nTPM: 0.8
RHH5304_R3670
8.5
RHH5212_R3583
4.8
RHH5240_R3612
0.8
RHH5269_R3641
1.5
Memory CD4 T-cell Th2 nTPM: 5.4
Samples: 4
Max nTPM: 8.3
Min nTPM: 4.0
RHH5305_R3671
4.0
RHH5213_R3584
8.3
RHH5241_R3613
5.1
RHH5270_R3642
4.2
Naive CD4 T-cell nTPM: 2.9
Samples: 4
Max nTPM: 8.0
Min nTPM: 0.0
RHH5306_R3672
0.0
RHH5214_R3585
8.0
RHH5242_R3614
1.1
RHH5271_R3643
2.3
Naive CD8 T-cell nTPM: 2.5
Samples: 4
Max nTPM: 8.0
Min nTPM: 0.0
RHH5201_R3572
1.2
RHH5229_R3601
0.0
RHH5258_R3630
8.0
RHH5287_R3659
0.6
Non-Vd2 gdTCR nTPM: 10.9
Samples: 4
Max nTPM: 13.8
Min nTPM: 7.6
RHH5235_R3607
7.6
RHH5264_R3636
9.4
RHH5207_R3578
12.9
RHH5299_R3665
13.8
T-reg nTPM: 8.4
Samples: 4
Max nTPM: 11.8
Min nTPM: 2.3
RHH5301_R3667
11.8
RHH5237_R3609
9.6
RHH5266_R3638
2.3
RHH5209_R3580
9.8
Terminal effector memory CD4 T-cell nTPM: 5.9
Samples: 2
Max nTPM: 8.4
Min nTPM: 3.3
RHH5243_R3615
3.3
RHH5272_R3644
8.4
Terminal effector memory CD8 T-cell nTPM: 17.8
Samples: 4
Max nTPM: 31.9
Min nTPM: 8.0
RHH5232_R3604
8.0
RHH5204_R3575
31.9
RHH5261_R3633
8.0
RHH5296_R3662
23.4
Vd2 gdTCR nTPM: 7.4
Samples: 4
Max nTPM: 18.6
Min nTPM: 2.4
RHH5234_R3606
4.0
RHH5206_R3577
18.6
RHH5263_R3635
4.7
RHH5298_R3664
2.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
