HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:39.6 nTPM
HPA Brain:41.3 nTPM
GTEx:39.6 nTPM
FANTOM5:60.0 Scaled Tags Per Million
Pig:31.9 nTPM
Mouse:20.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053866
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.3
Sample id Sample description nTPM
Hippocampus
nTPM: 39.2
1855 Male, age 76, left hemisphere 46.8
1898 Male, age 80, left hemisphere 40.9
2621 Female, age 67, right hemisphere 39.5
2148 Female, age 91, left hemisphere 37.9
1911 Female, age 85, right hemisphere 36.4
2529 Female, age 94, left hemisphere 33.5
Dentate gyrus
nTPM: 35.8
2010 Male, age 76, both hemispheres 45.0
1927 Female, age 91, both hemispheres 41.7
2246 Female, age 85, both hemispheres 35.6
2528 Male, age 74, both hemispheres 33.3
2531 Female, age 67, both hemispheres 31.0
2530 Female, age 94, left hemisphere 27.9
Entorhinal gyrus
nTPM: 36.3
1938 Female, age 85, left hemisphere 44.3
2764 Male, age 80, right hemisphere 37.9
1787 Male, age 76, left hemisphere 36.5
2613 Female, age 94, left hemisphere 34.4
2117 Female, age 91, right hemisphere 33.1
2686 Male, age 75, right hemisphere 31.5
Hippocampus, CA1
nTPM: 41.3
2749 Male, age 80, left hemisphere 55.3
1873 Female, age 85, both hemispheres 42.2
2045 Male, age 76, both hemispheres 42.1
2082 Female, age 91, right hemisphere 35.1
2527 Male, age 74, both hemispheres 31.9
Hippocampus, CA2
nTPM: 36.8
1892 Male, age 76, both hemispheres 45.9
1963 Male, age 80, left hemisphere 42.6
2113 Female, age 91, right hemisphere 37.2
1940 Female, age 85, left hemisphere 35.4
2249 Male, age 74, both hemispheres 35.1
2437 Female, age 94, left hemisphere 24.6
Hippocampus, CA3
nTPM: 38.1
2137 Male, age 80, left hemisphere 46.2
1867 Male, age 76, both hemispheres 40.9
2436 Male, age 74, both hemispheres 37.3
1891 Female, age 85, both hemispheres 36.9
2620 Female, age 94, left hemisphere 34.2
2861 Female, age 67, both hemispheres 32.9
Parahippocampal cortex
nTPM: 36.2
2018 Male, age 76, both hemispheres 42.1
1850 Male, age 80, both hemispheres 41.4
2693 Female, age 94, both hemispheres 39.0
1933 Female, age 85, both hemispheres 38.2
2692 Male, age 74, both hemispheres 35.9
1990 Female, age 91, right hemisphere 34.6
2250 Female, age 67, right hemisphere 33.4
2245 Female, age 91, both hemispheres 33.1
2622 Female, age 67, right hemisphere 32.4
2532 Female, age 72, left hemisphere 32.3
Perirhinal gyrus
nTPM: 38.3
1794 Male, age 80, right hemisphere 42.3
1841 Female, age 85, right hemisphere 39.3
2848 Male, age 76, right hemisphere 38.0
1847 Female, age 91, left hemisphere 37.1
2521 Female, age 94, right hemisphere 34.6
Subiculum
nTPM: 34.7
2729 Female, age 91, right hemisphere 37.1
1901 Male, age 80, both hemispheres 36.5
2042 Male, age 76, both hemispheres 36.3
1977 Female, age 85, both hemispheres 35.3
2619 Male, age 74, both hemispheres 34.5
2438 Female, age 94, left hemisphere 28.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.6
Samples: 197

Max nTPM: 85.5
Min nTPM: 17.8
Std nTPM: 11.9
Median nTPM: 38.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 85.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 81.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 79.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 74.7
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 68.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 67.1
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 62.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 61.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 60.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 60.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 59.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.0
FF:10169-103B7 60 years, female 97.6
FF:10153-102I9 76 years, female 22.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.9
Pig sample Sample description nTPM
Subiculum
nTPM: 31.9
Samples: 4

Max nTPM: 37.0
Min nTPM: 29.4
Sample A Female 37.0
Sample B Female 29.4
Sample C Male 31.4
Sample D Male 29.8
Dorsal hippocampus
nTPM: 28.7
Samples: 4

Max nTPM: 30.9
Min nTPM: 26.0
Sample A Female 30.9
Sample B Female 29.4
Sample C Male 28.6
Sample D Male 26.0
Entorhinal cortex
nTPM: 31.7
Samples: 4

Max nTPM: 34.3
Min nTPM: 27.9
Sample A Female 30.3
Sample B Female 34.3
Sample C Male 34.2
Sample D Male 27.9
Ventral hippocampus
nTPM: 29.1
Samples: 4

Max nTPM: 32.3
Min nTPM: 25.0
Sample A Female 32.3
Sample B Female 31.6
Sample C Male 27.4
Sample D Male 25.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.5
Samples: 4

Max nTPM: 23.5
Min nTPM: 17.9
Sample A Male 18.0
Sample B Male 23.5
Sample C Female 22.6
Sample D Female 17.9
Hippocampal formation
nTPM: 20.3
Samples: 4

Max nTPM: 24.7
Min nTPM: 17.2
Sample A Male 24.7
Sample B Male 17.7
Sample C Female 17.2
Sample D Female 21.6

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