We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
452.6
nTPM
Monaco:
182.7
nTPM
Schmiedel:
16.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
452.6
HPA sample
nTPM
gdT-cell nTPM: 374.7
Samples: 6
Max nTPM: 438.8
Min nTPM: 291.6
P10809_1007
366.0
P10809_1022
386.1
P10809_1041
410.2
P10809_1060
291.6
P10809_1077
438.8
P10809_1098
355.5
MAIT T-cell nTPM: 370.8
Samples: 6
Max nTPM: 417.5
Min nTPM: 303.5
P10809_1006
303.5
P10809_1024
394.0
P10809_1043
342.3
P10809_1062
372.4
P10809_1083
395.1
P10809_1097
417.5
Memory CD4 T-cell nTPM: 415.3
Samples: 6
Max nTPM: 472.6
Min nTPM: 382.8
P10809_1014
387.4
P10809_1026
472.6
P10809_1045
401.3
P10809_1064
382.8
P10809_1086
400.1
P10809_1113
447.8
Memory CD8 T-cell nTPM: 381.1
Samples: 5
Max nTPM: 422.8
Min nTPM: 350.3
P10809_1012
358.9
P10809_1027
352.6
P10809_1046
421.0
P10809_1065
350.3
P10809_1111
422.8
Naive CD4 T-cell nTPM: 330.6
Samples: 6
Max nTPM: 369.6
Min nTPM: 287.7
P10809_1015
295.0
P10809_1030
353.6
P10809_1049
330.8
P10809_1068
287.7
P10809_1085
369.6
P10809_1112
346.8
Naive CD8 T-cell nTPM: 322.1
Samples: 6
Max nTPM: 375.1
Min nTPM: 289.2
P10809_1016
338.3
P10809_1031
304.3
P10809_1050
300.9
P10809_1069
324.8
P10809_1087
375.1
P10809_1110
289.2
T-reg nTPM: 452.6
Samples: 6
Max nTPM: 499.9
Min nTPM: 392.6
P10809_1018
392.6
P10809_1037
446.3
P10809_1056
472.7
P10809_1075
440.9
P10809_1094
463.1
P10809_1106
499.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
182.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 107.3
Samples: 4
Max nTPM: 161.4
Min nTPM: 53.7
RHH5202_R3573
53.7
RHH5230_R3602
87.6
RHH5259_R3631
161.4
RHH5288_R3660
126.4
Effector memory CD8 T-cell nTPM: 93.0
Samples: 4
Max nTPM: 135.3
Min nTPM: 62.6
RHH5203_R3574
96.5
RHH5231_R3603
77.6
RHH5260_R3632
135.3
RHH5289_R3661
62.6
MAIT T-cell nTPM: 112.2
Samples: 4
Max nTPM: 136.4
Min nTPM: 67.1
RHH5233_R3605
67.1
RHH5205_R3576
136.4
RHH5262_R3634
124.0
RHH5297_R3663
121.2
Memory CD4 T-cell TFH nTPM: 107.3
Samples: 4
Max nTPM: 124.7
Min nTPM: 90.5
RHH5300_R3666
124.7
RHH5236_R3608
118.0
RHH5265_R3637
90.5
RHH5208_R3579
95.8
Memory CD4 T-cell Th1 nTPM: 129.1
Samples: 4
Max nTPM: 167.9
Min nTPM: 67.1
RHH5210_R3581
67.1
RHH5302_R3668
138.9
RHH5238_R3610
167.9
RHH5267_R3639
142.3
Memory CD4 T-cell Th1/Th17 nTPM: 118.1
Samples: 4
Max nTPM: 166.8
Min nTPM: 74.7
RHH5303_R3669
125.9
RHH5211_R3582
74.7
RHH5239_R3611
104.9
RHH5268_R3640
166.8
Memory CD4 T-cell Th17 nTPM: 103.7
Samples: 4
Max nTPM: 127.6
Min nTPM: 87.1
RHH5304_R3670
127.6
RHH5212_R3583
92.7
RHH5240_R3612
87.1
RHH5269_R3641
107.3
Memory CD4 T-cell Th2 nTPM: 109.5
Samples: 4
Max nTPM: 177.5
Min nTPM: 67.7
RHH5305_R3671
177.5
RHH5213_R3584
84.6
RHH5241_R3613
67.7
RHH5270_R3642
108.2
Naive CD4 T-cell nTPM: 100.5
Samples: 4
Max nTPM: 138.8
Min nTPM: 68.7
RHH5306_R3672
106.5
RHH5214_R3585
138.8
RHH5242_R3614
68.7
RHH5271_R3643
88.1
Naive CD8 T-cell nTPM: 80.4
Samples: 4
Max nTPM: 100.8
Min nTPM: 65.5
RHH5201_R3572
65.5
RHH5229_R3601
88.0
RHH5258_R3630
67.1
RHH5287_R3659
100.8
Non-Vd2 gdTCR nTPM: 125.9
Samples: 4
Max nTPM: 170.4
Min nTPM: 97.4
RHH5235_R3607
119.1
RHH5264_R3636
116.6
RHH5207_R3578
97.4
RHH5299_R3665
170.4
T-reg nTPM: 103.7
Samples: 4
Max nTPM: 138.6
Min nTPM: 69.9
RHH5301_R3667
138.6
RHH5237_R3609
69.9
RHH5266_R3638
107.3
RHH5209_R3580
99.1
Terminal effector memory CD4 T-cell nTPM: 95.6
Samples: 2
Max nTPM: 105.9
Min nTPM: 85.2
RHH5243_R3615
85.2
RHH5272_R3644
105.9
Terminal effector memory CD8 T-cell nTPM: 150.8
Samples: 4
Max nTPM: 270.7
Min nTPM: 60.4
RHH5232_R3604
60.4
RHH5204_R3575
270.7
RHH5261_R3633
161.2
RHH5296_R3662
110.9
Vd2 gdTCR nTPM: 182.8
Samples: 4
Max nTPM: 309.0
Min nTPM: 80.1
RHH5234_R3606
80.1
RHH5206_R3577
309.0
RHH5263_R3635
143.5
RHH5298_R3664
198.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
