HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:116.0 nTPM
HPA Brain:292.0 nTPM
GTEx:116.0 nTPM
FANTOM5:629.1 Scaled Tags Per Million
Pig:418.4 nTPM
Mouse:836.5 nTPM
Allen mouse:20.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047157Antibody CAB005610
Glial cells Not detectedHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 292.0
Sample id Sample description nTPM
Hippocampus
nTPM: 229.5
1898 Male, age 80, left hemisphere 279.6
1911 Female, age 85, right hemisphere 278.1
2621 Female, age 67, right hemisphere 276.1
1855 Male, age 76, left hemisphere 192.8
2148 Female, age 91, left hemisphere 192.3
2529 Female, age 94, left hemisphere 158.3
Dentate gyrus
nTPM: 223.3
1927 Female, age 91, both hemispheres 332.6
2010 Male, age 76, both hemispheres 217.0
2246 Female, age 85, both hemispheres 216.8
2531 Female, age 67, both hemispheres 198.8
2530 Female, age 94, left hemisphere 197.6
2528 Male, age 74, both hemispheres 176.8
Entorhinal gyrus
nTPM: 194.2
1938 Female, age 85, left hemisphere 249.9
2613 Female, age 94, left hemisphere 249.8
2764 Male, age 80, right hemisphere 206.2
1787 Male, age 76, left hemisphere 187.4
2686 Male, age 75, right hemisphere 144.8
2117 Female, age 91, right hemisphere 127.0
Hippocampus, CA1
nTPM: 288.0
2749 Male, age 80, left hemisphere 564.6
1873 Female, age 85, both hemispheres 266.4
2527 Male, age 74, both hemispheres 229.5
2045 Male, age 76, both hemispheres 212.7
2082 Female, age 91, right hemisphere 166.6
Hippocampus, CA2
nTPM: 235.5
1892 Male, age 76, both hemispheres 317.3
1963 Male, age 80, left hemisphere 267.9
2249 Male, age 74, both hemispheres 252.1
1940 Female, age 85, left hemisphere 224.9
2113 Female, age 91, right hemisphere 191.9
2437 Female, age 94, left hemisphere 158.8
Hippocampus, CA3
nTPM: 292.0
2137 Male, age 80, left hemisphere 561.6
1867 Male, age 76, both hemispheres 274.7
2620 Female, age 94, left hemisphere 246.0
2436 Male, age 74, both hemispheres 245.2
2861 Female, age 67, both hemispheres 224.5
1891 Female, age 85, both hemispheres 199.9
Parahippocampal cortex
nTPM: 226.7
2245 Female, age 91, both hemispheres 297.2
1850 Male, age 80, both hemispheres 272.9
1990 Female, age 91, right hemisphere 237.0
2622 Female, age 67, right hemisphere 232.6
1933 Female, age 85, both hemispheres 232.2
2250 Female, age 67, right hemisphere 229.7
2532 Female, age 72, left hemisphere 218.3
2693 Female, age 94, both hemispheres 208.8
2018 Male, age 76, both hemispheres 194.4
2692 Male, age 74, both hemispheres 144.3
Perirhinal gyrus
nTPM: 278.4
1847 Female, age 91, left hemisphere 339.9
1841 Female, age 85, right hemisphere 306.2
2521 Female, age 94, right hemisphere 282.6
1794 Male, age 80, right hemisphere 255.0
2848 Male, age 76, right hemisphere 208.4
Subiculum
nTPM: 195.5
1901 Male, age 80, both hemispheres 304.7
2042 Male, age 76, both hemispheres 201.7
1977 Female, age 85, both hemispheres 193.0
2438 Female, age 94, left hemisphere 175.2
2619 Male, age 74, both hemispheres 152.5
2729 Female, age 91, right hemisphere 146.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 116.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 116.0
Samples: 197

Max nTPM: 401.0
Min nTPM: 18.7
Std nTPM: 70.0
Median nTPM: 108.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 401.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 325.0
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 313.7
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 294.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 291.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 282.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 274.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 265.6
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 254.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 246.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 227.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 629.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 629.1
FF:10169-103B7 60 years, female 913.9
FF:10153-102I9 76 years, female 344.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 418.4
Pig sample Sample description nTPM
Subiculum
nTPM: 204.9
Samples: 4

Max nTPM: 268.8
Min nTPM: 175.8
Sample A Female 268.8
Sample B Female 177.9
Sample C Male 197.2
Sample D Male 175.8
Dorsal hippocampus
nTPM: 418.4
Samples: 4

Max nTPM: 556.8
Min nTPM: 310.8
Sample A Female 556.8
Sample B Female 488.2
Sample C Male 310.8
Sample D Male 317.7
Entorhinal cortex
nTPM: 262.7
Samples: 4

Max nTPM: 292.7
Min nTPM: 235.5
Sample A Female 272.2
Sample B Female 292.7
Sample C Male 250.5
Sample D Male 235.5
Ventral hippocampus
nTPM: 302.4
Samples: 4

Max nTPM: 622.3
Min nTPM: 193.3
Sample A Female 194.6
Sample B Female 193.3
Sample C Male 199.3
Sample D Male 622.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 836.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 628.5
Samples: 4

Max nTPM: 659.9
Min nTPM: 608.9
Sample A Male 618.6
Sample B Male 659.9
Sample C Female 626.7
Sample D Female 608.9
Hippocampal formation
nTPM: 836.5
Samples: 4

Max nTPM: 939.7
Min nTPM: 713.5
Sample A Male 829.8
Sample B Male 863.1
Sample C Female 939.7
Sample D Female 713.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 20.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 20.1
70812895 Antisense, RP_050712_02_H01, Mouse strain C57BL/6J (56 days, male) 20.1

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