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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
2956.4
nTPM
Monaco:
517.5
nTPM
Schmiedel:
784.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2956.4
HPA sample
nTPM
gdT-cell nTPM: 1766.2
Samples: 6
Max nTPM: 2117.9
Min nTPM: 1257.4
P10809_1007
2117.9
P10809_1022
1948.6
P10809_1041
1993.2
P10809_1060
1257.4
P10809_1077
1609.0
P10809_1098
1671.0
MAIT T-cell nTPM: 2407.3
Samples: 6
Max nTPM: 2846.6
Min nTPM: 1907.9
P10809_1006
2169.7
P10809_1024
2557.8
P10809_1043
2660.4
P10809_1062
2301.5
P10809_1083
1907.9
P10809_1097
2846.6
Memory CD4 T-cell nTPM: 2625.0
Samples: 6
Max nTPM: 3156.5
Min nTPM: 1904.3
P10809_1014
2738.0
P10809_1026
3156.5
P10809_1045
2967.9
P10809_1064
2196.2
P10809_1086
1904.3
P10809_1113
2787.3
Memory CD8 T-cell nTPM: 2120.7
Samples: 5
Max nTPM: 2430.7
Min nTPM: 1882.7
P10809_1012
2154.3
P10809_1027
2063.9
P10809_1046
2430.7
P10809_1065
1882.7
P10809_1111
2071.7
Naive CD4 T-cell nTPM: 2956.5
Samples: 6
Max nTPM: 3302.7
Min nTPM: 2217.7
P10809_1015
3235.1
P10809_1030
3243.1
P10809_1049
3302.7
P10809_1068
2795.3
P10809_1085
2217.7
P10809_1112
2944.8
Naive CD8 T-cell nTPM: 2453.3
Samples: 6
Max nTPM: 3532.7
Min nTPM: 1562.9
P10809_1016
3532.7
P10809_1031
2493.3
P10809_1050
2332.7
P10809_1069
2311.6
P10809_1087
1562.9
P10809_1110
2486.7
T-reg nTPM: 2258.2
Samples: 6
Max nTPM: 2442.1
Min nTPM: 1942.0
P10809_1018
1942.0
P10809_1037
2288.5
P10809_1056
2236.7
P10809_1075
2252.6
P10809_1094
2387.1
P10809_1106
2442.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
517.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 379.6
Samples: 4
Max nTPM: 539.7
Min nTPM: 200.1
RHH5202_R3573
200.1
RHH5230_R3602
481.5
RHH5259_R3631
539.7
RHH5288_R3660
296.9
Effector memory CD8 T-cell nTPM: 209.4
Samples: 4
Max nTPM: 359.2
Min nTPM: 144.5
RHH5203_R3574
159.7
RHH5231_R3603
174.0
RHH5260_R3632
359.2
RHH5289_R3661
144.5
MAIT T-cell nTPM: 302.1
Samples: 4
Max nTPM: 361.2
Min nTPM: 215.0
RHH5233_R3605
215.0
RHH5205_R3576
326.6
RHH5262_R3634
361.2
RHH5297_R3663
305.5
Memory CD4 T-cell TFH nTPM: 274.8
Samples: 4
Max nTPM: 338.3
Min nTPM: 201.4
RHH5300_R3666
288.5
RHH5236_R3608
338.3
RHH5265_R3637
270.8
RHH5208_R3579
201.4
Memory CD4 T-cell Th1 nTPM: 471.9
Samples: 4
Max nTPM: 724.8
Min nTPM: 193.8
RHH5210_R3581
193.8
RHH5302_R3668
513.8
RHH5238_R3610
724.8
RHH5267_R3639
455.2
Memory CD4 T-cell Th1/Th17 nTPM: 400.5
Samples: 4
Max nTPM: 549.8
Min nTPM: 241.6
RHH5303_R3669
309.9
RHH5211_R3582
241.6
RHH5239_R3611
500.7
RHH5268_R3640
549.8
Memory CD4 T-cell Th17 nTPM: 394.3
Samples: 4
Max nTPM: 559.9
Min nTPM: 281.4
RHH5304_R3670
559.9
RHH5212_R3583
281.4
RHH5240_R3612
375.4
RHH5269_R3641
360.4
Memory CD4 T-cell Th2 nTPM: 395.8
Samples: 4
Max nTPM: 609.2
Min nTPM: 302.0
RHH5305_R3671
609.2
RHH5213_R3584
355.5
RHH5241_R3613
316.6
RHH5270_R3642
302.0
Naive CD4 T-cell nTPM: 517.5
Samples: 4
Max nTPM: 649.1
Min nTPM: 361.1
RHH5306_R3672
649.1
RHH5214_R3585
559.7
RHH5242_R3614
361.1
RHH5271_R3643
500.2
Naive CD8 T-cell nTPM: 419.4
Samples: 4
Max nTPM: 607.8
Min nTPM: 209.7
RHH5201_R3572
209.7
RHH5229_R3601
607.8
RHH5258_R3630
288.2
RHH5287_R3659
571.9
Non-Vd2 gdTCR nTPM: 252.1
Samples: 4
Max nTPM: 366.9
Min nTPM: 199.6
RHH5235_R3607
366.9
RHH5264_R3636
200.6
RHH5207_R3578
199.6
RHH5299_R3665
241.1
T-reg nTPM: 342.9
Samples: 4
Max nTPM: 412.3
Min nTPM: 224.0
RHH5301_R3667
412.3
RHH5237_R3609
224.0
RHH5266_R3638
354.1
RHH5209_R3580
381.2
Terminal effector memory CD4 T-cell nTPM: 265.0
Samples: 2
Max nTPM: 317.6
Min nTPM: 212.4
RHH5243_R3615
317.6
RHH5272_R3644
212.4
Terminal effector memory CD8 T-cell nTPM: 317.4
Samples: 4
Max nTPM: 472.9
Min nTPM: 165.6
RHH5232_R3604
165.6
RHH5204_R3575
472.9
RHH5261_R3633
383.8
RHH5296_R3662
247.1
Vd2 gdTCR nTPM: 436.7
Samples: 4
Max nTPM: 652.6
Min nTPM: 297.9
RHH5234_R3606
297.9
RHH5206_R3577
652.6
RHH5263_R3635
380.5
RHH5298_R3664
415.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.