HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:20.5 nTPM
HPA Brain:28.9 nTPM
GTEx:20.5 nTPM
FANTOM5:27.0 Scaled Tags Per Million
Mouse:15.3 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056832
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.9
Sample id Sample description nTPM
Hippocampus
nTPM: 27.6
2529 Female, age 94, left hemisphere 28.9
2621 Female, age 67, right hemisphere 28.4
2148 Female, age 91, left hemisphere 27.6
1911 Female, age 85, right hemisphere 27.4
1898 Male, age 80, left hemisphere 26.8
1855 Male, age 76, left hemisphere 26.7
Dentate gyrus
nTPM: 25.4
2531 Female, age 67, both hemispheres 29.9
2530 Female, age 94, left hemisphere 27.6
2528 Male, age 74, both hemispheres 24.4
1927 Female, age 91, both hemispheres 24.1
2010 Male, age 76, both hemispheres 23.6
2246 Female, age 85, both hemispheres 22.8
Entorhinal gyrus
nTPM: 26.2
2613 Female, age 94, left hemisphere 28.5
1787 Male, age 76, left hemisphere 28.4
2764 Male, age 80, right hemisphere 27.6
2686 Male, age 75, right hemisphere 26.1
2117 Female, age 91, right hemisphere 24.1
1938 Female, age 85, left hemisphere 22.5
Hippocampus, CA1
nTPM: 25.2
2749 Male, age 80, left hemisphere 29.9
2527 Male, age 74, both hemispheres 26.5
1873 Female, age 85, both hemispheres 23.6
2045 Male, age 76, both hemispheres 23.5
2082 Female, age 91, right hemisphere 22.5
Hippocampus, CA2
nTPM: 25.1
2437 Female, age 94, left hemisphere 28.5
1892 Male, age 76, both hemispheres 27.1
2249 Male, age 74, both hemispheres 25.6
1963 Male, age 80, left hemisphere 24.4
2113 Female, age 91, right hemisphere 23.8
1940 Female, age 85, left hemisphere 21.4
Hippocampus, CA3
nTPM: 28.9
2861 Female, age 67, both hemispheres 38.5
2436 Male, age 74, both hemispheres 30.9
2620 Female, age 94, left hemisphere 29.9
2137 Male, age 80, left hemisphere 27.6
1867 Male, age 76, both hemispheres 25.2
1891 Female, age 85, both hemispheres 21.1
Parahippocampal cortex
nTPM: 23.8
2622 Female, age 67, right hemisphere 29.7
2245 Female, age 91, both hemispheres 28.0
2532 Female, age 72, left hemisphere 25.5
2692 Male, age 74, both hemispheres 23.7
2250 Female, age 67, right hemisphere 23.1
1933 Female, age 85, both hemispheres 22.5
1990 Female, age 91, right hemisphere 22.1
2693 Female, age 94, both hemispheres 21.7
2018 Male, age 76, both hemispheres 20.9
1850 Male, age 80, both hemispheres 20.4
Perirhinal gyrus
nTPM: 23.5
1794 Male, age 80, right hemisphere 25.7
1847 Female, age 91, left hemisphere 23.8
2521 Female, age 94, right hemisphere 22.9
2848 Male, age 76, right hemisphere 22.9
1841 Female, age 85, right hemisphere 22.1
Subiculum
nTPM: 23.9
2619 Male, age 74, both hemispheres 25.6
2729 Female, age 91, right hemisphere 24.8
2438 Female, age 94, left hemisphere 24.2
1901 Male, age 80, both hemispheres 23.7
2042 Male, age 76, both hemispheres 23.1
1977 Female, age 85, both hemispheres 22.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.5
Samples: 197

Max nTPM: 47.5
Min nTPM: 6.9
Std nTPM: 6.5
Median nTPM: 19.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 47.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 41.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 39.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 36.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 34.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 33.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 32.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 32.5
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 31.7
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 31.7
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 31.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.0
FF:10153-102I9 76 years, female 33.2
FF:10169-103B7 60 years, female 20.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.6
Samples: 4

Max nTPM: 14.7
Min nTPM: 13.1
Sample A Male 13.2
Sample B Male 13.1
Sample C Female 13.3
Sample D Female 14.7
Hippocampal formation
nTPM: 15.3
Samples: 4

Max nTPM: 15.9
Min nTPM: 14.4
Sample A Male 15.9
Sample B Male 15.4
Sample C Female 15.5
Sample D Female 14.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
69080038 Antisense, RP_050324_01_F01, Mouse strain C57BL/6J (56 days, male) 1.4

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