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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
96.7
nTPM
Monaco:
22.8
nTPM
Schmiedel:
93.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
96.7
HPA sample
nTPM
gdT-cell nTPM: 73.6
Samples: 6
Max nTPM: 100.3
Min nTPM: 23.6
P10809_1007
79.2
P10809_1022
76.9
P10809_1041
100.3
P10809_1060
23.6
P10809_1077
73.6
P10809_1098
87.8
MAIT T-cell nTPM: 73.7
Samples: 6
Max nTPM: 111.0
Min nTPM: 41.6
P10809_1006
67.0
P10809_1024
41.6
P10809_1043
111.0
P10809_1062
42.9
P10809_1083
70.1
P10809_1097
109.3
Memory CD4 T-cell nTPM: 80.6
Samples: 6
Max nTPM: 111.1
Min nTPM: 54.0
P10809_1014
74.5
P10809_1026
102.2
P10809_1045
111.1
P10809_1064
86.6
P10809_1086
55.4
P10809_1113
54.0
Memory CD8 T-cell nTPM: 89.0
Samples: 5
Max nTPM: 116.7
Min nTPM: 64.7
P10809_1012
66.1
P10809_1027
64.7
P10809_1046
116.7
P10809_1065
81.1
P10809_1111
116.2
Naive CD4 T-cell nTPM: 96.7
Samples: 6
Max nTPM: 153.6
Min nTPM: 67.1
P10809_1015
67.1
P10809_1030
96.4
P10809_1049
153.6
P10809_1068
73.1
P10809_1085
83.9
P10809_1112
106.2
Naive CD8 T-cell nTPM: 94.7
Samples: 6
Max nTPM: 134.0
Min nTPM: 41.3
P10809_1016
88.9
P10809_1031
102.8
P10809_1050
113.8
P10809_1069
87.3
P10809_1087
41.3
P10809_1110
134.0
T-reg nTPM: 87.5
Samples: 6
Max nTPM: 127.1
Min nTPM: 32.0
P10809_1018
61.0
P10809_1037
93.5
P10809_1056
127.1
P10809_1075
90.1
P10809_1094
32.0
P10809_1106
121.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
22.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 12.8
Samples: 4
Max nTPM: 20.0
Min nTPM: 5.1
RHH5202_R3573
13.0
RHH5230_R3602
13.2
RHH5259_R3631
20.0
RHH5288_R3660
5.1
Effector memory CD8 T-cell nTPM: 12.1
Samples: 4
Max nTPM: 21.2
Min nTPM: 1.8
RHH5203_R3574
1.8
RHH5231_R3603
21.2
RHH5260_R3632
13.7
RHH5289_R3661
11.6
MAIT T-cell nTPM: 9.6
Samples: 4
Max nTPM: 16.0
Min nTPM: 2.8
RHH5233_R3605
6.8
RHH5205_R3576
2.8
RHH5262_R3634
12.7
RHH5297_R3663
16.0
Memory CD4 T-cell TFH nTPM: 11.5
Samples: 4
Max nTPM: 20.9
Min nTPM: 0.0
RHH5300_R3666
20.9
RHH5236_R3608
9.7
RHH5265_R3637
15.4
RHH5208_R3579
0.0
Memory CD4 T-cell Th1 nTPM: 12.9
Samples: 4
Max nTPM: 24.2
Min nTPM: 1.5
RHH5210_R3581
1.5
RHH5302_R3668
11.4
RHH5238_R3610
24.2
RHH5267_R3639
14.6
Memory CD4 T-cell Th1/Th17 nTPM: 7.9
Samples: 4
Max nTPM: 14.0
Min nTPM: 1.6
RHH5303_R3669
1.6
RHH5211_R3582
5.2
RHH5239_R3611
10.6
RHH5268_R3640
14.0
Memory CD4 T-cell Th17 nTPM: 10.9
Samples: 4
Max nTPM: 16.0
Min nTPM: 7.0
RHH5304_R3670
8.3
RHH5212_R3583
16.0
RHH5240_R3612
7.0
RHH5269_R3641
12.4
Memory CD4 T-cell Th2 nTPM: 11.1
Samples: 4
Max nTPM: 19.4
Min nTPM: 6.6
RHH5305_R3671
19.4
RHH5213_R3584
6.8
RHH5241_R3613
6.6
RHH5270_R3642
11.5
Naive CD4 T-cell nTPM: 18.2
Samples: 4
Max nTPM: 24.5
Min nTPM: 10.1
RHH5306_R3672
21.4
RHH5214_R3585
10.1
RHH5242_R3614
24.5
RHH5271_R3643
16.6
Naive CD8 T-cell nTPM: 9.5
Samples: 4
Max nTPM: 19.1
Min nTPM: 1.9
RHH5201_R3572
1.9
RHH5229_R3601
19.1
RHH5258_R3630
3.6
RHH5287_R3659
13.5
Non-Vd2 gdTCR nTPM: 11.6
Samples: 4
Max nTPM: 19.6
Min nTPM: 0.2
RHH5235_R3607
17.0
RHH5264_R3636
9.5
RHH5207_R3578
0.2
RHH5299_R3665
19.6
T-reg nTPM: 13.6
Samples: 4
Max nTPM: 17.8
Min nTPM: 11.2
RHH5301_R3667
12.7
RHH5237_R3609
17.8
RHH5266_R3638
11.2
RHH5209_R3580
12.7
Terminal effector memory CD4 T-cell nTPM: 4.1
Samples: 2
Max nTPM: 5.6
Min nTPM: 2.5
RHH5243_R3615
2.5
RHH5272_R3644
5.6
Terminal effector memory CD8 T-cell nTPM: 10.2
Samples: 4
Max nTPM: 13.8
Min nTPM: 7.0
RHH5232_R3604
9.9
RHH5204_R3575
10.1
RHH5261_R3633
13.8
RHH5296_R3662
7.0
Vd2 gdTCR nTPM: 22.8
Samples: 4
Max nTPM: 32.5
Min nTPM: 5.7
RHH5234_R3606
5.7
RHH5206_R3577
30.7
RHH5263_R3635
22.4
RHH5298_R3664
32.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
