HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:152.4 nTPM
HPA Brain:69.1 nTPM
GTEx:152.4 nTPM
FANTOM5:35.0 Scaled Tags Per Million
Pig:108.4 nTPM
Mouse:107.2 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045542
Glial cells Not detected
Neuronal cells Medium

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 69.1
Sample id Sample description nTPM
Hippocampus
nTPM: 62.3
1855 Male, age 76, left hemisphere 70.8
1898 Male, age 80, left hemisphere 70.2
2621 Female, age 67, right hemisphere 69.0
2529 Female, age 94, left hemisphere 56.6
1911 Female, age 85, right hemisphere 53.5
2148 Female, age 91, left hemisphere 53.3
Dentate gyrus
nTPM: 61.1
2530 Female, age 94, left hemisphere 77.2
2010 Male, age 76, both hemispheres 68.2
1927 Female, age 91, both hemispheres 62.5
2528 Male, age 74, both hemispheres 54.7
2246 Female, age 85, both hemispheres 52.0
2531 Female, age 67, both hemispheres 52.0
Entorhinal gyrus
nTPM: 69.1
2613 Female, age 94, left hemisphere 78.0
2764 Male, age 80, right hemisphere 74.3
1787 Male, age 76, left hemisphere 69.1
2686 Male, age 75, right hemisphere 68.9
1938 Female, age 85, left hemisphere 63.7
2117 Female, age 91, right hemisphere 60.4
Hippocampus, CA1
nTPM: 59.4
2749 Male, age 80, left hemisphere 72.5
1873 Female, age 85, both hemispheres 68.0
2045 Male, age 76, both hemispheres 58.0
2527 Male, age 74, both hemispheres 50.0
2082 Female, age 91, right hemisphere 48.7
Hippocampus, CA2
nTPM: 59.3
1963 Male, age 80, left hemisphere 69.6
1892 Male, age 76, both hemispheres 65.1
2437 Female, age 94, left hemisphere 62.8
1940 Female, age 85, left hemisphere 60.6
2113 Female, age 91, right hemisphere 49.0
2249 Male, age 74, both hemispheres 48.8
Hippocampus, CA3
nTPM: 59.3
2861 Female, age 67, both hemispheres 75.1
1867 Male, age 76, both hemispheres 65.0
2620 Female, age 94, left hemisphere 60.3
2137 Male, age 80, left hemisphere 56.7
1891 Female, age 85, both hemispheres 51.8
2436 Male, age 74, both hemispheres 47.0
Parahippocampal cortex
nTPM: 63.2
2622 Female, age 67, right hemisphere 72.3
1933 Female, age 85, both hemispheres 69.0
2018 Male, age 76, both hemispheres 66.4
2532 Female, age 72, left hemisphere 64.2
2245 Female, age 91, both hemispheres 63.5
2692 Male, age 74, both hemispheres 61.4
2250 Female, age 67, right hemisphere 61.0
1850 Male, age 80, both hemispheres 60.8
2693 Female, age 94, both hemispheres 59.5
1990 Female, age 91, right hemisphere 54.3
Perirhinal gyrus
nTPM: 60.6
1847 Female, age 91, left hemisphere 65.7
1794 Male, age 80, right hemisphere 64.3
1841 Female, age 85, right hemisphere 59.7
2521 Female, age 94, right hemisphere 56.6
2848 Male, age 76, right hemisphere 56.6
Subiculum
nTPM: 58.3
2619 Male, age 74, both hemispheres 69.0
2042 Male, age 76, both hemispheres 63.2
1977 Female, age 85, both hemispheres 60.5
1901 Male, age 80, both hemispheres 59.4
2729 Female, age 91, right hemisphere 50.7
2438 Female, age 94, left hemisphere 47.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 152.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 152.4
Samples: 197

Max nTPM: 296.0
Min nTPM: 60.4
Std nTPM: 39.7
Median nTPM: 146.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 296.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 287.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 282.1
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 259.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 245.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 242.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 240.0
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 239.6
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 227.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 223.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 222.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.0
FF:10153-102I9 76 years, female 52.4
FF:10169-103B7 60 years, female 17.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 108.4
Pig sample Sample description nTPM
Subiculum
nTPM: 94.7
Samples: 4

Max nTPM: 134.3
Min nTPM: 71.5
Sample A Female 134.3
Sample B Female 85.0
Sample C Male 71.5
Sample D Male 88.1
Dorsal hippocampus
nTPM: 84.8
Samples: 4

Max nTPM: 108.3
Min nTPM: 64.8
Sample A Female 108.3
Sample B Female 75.9
Sample C Male 90.2
Sample D Male 64.8
Entorhinal cortex
nTPM: 108.4
Samples: 4

Max nTPM: 144.0
Min nTPM: 85.2
Sample A Female 92.3
Sample B Female 112.1
Sample C Male 144.0
Sample D Male 85.2
Ventral hippocampus
nTPM: 79.9
Samples: 4

Max nTPM: 109.9
Min nTPM: 59.3
Sample A Female 83.7
Sample B Female 66.7
Sample C Male 109.9
Sample D Male 59.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 107.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 107.2
Samples: 4

Max nTPM: 112.2
Min nTPM: 98.1
Sample A Male 98.1
Sample B Male 107.9
Sample C Female 110.6
Sample D Female 112.2
Hippocampal formation
nTPM: 103.6
Samples: 4

Max nTPM: 114.6
Min nTPM: 89.4
Sample A Male 114.6
Sample B Male 89.4
Sample C Female 106.0
Sample D Female 104.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
69528100 Antisense, RP_050421_03_B03, Mouse strain C57BL/6J (56 days, male) 2.2

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