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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
459.6
nTPM
Monaco:
3205.6
nTPM
Schmiedel:
104.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
459.6
HPA sample
nTPM
gdT-cell nTPM: 459.6
Samples: 6
Max nTPM: 704.9
Min nTPM: 187.1
P10809_1007
458.5
P10809_1022
606.1
P10809_1041
187.1
P10809_1060
704.9
P10809_1077
549.1
P10809_1098
251.9
MAIT T-cell nTPM: 237.5
Samples: 6
Max nTPM: 325.3
Min nTPM: 129.0
P10809_1006
269.3
P10809_1024
325.3
P10809_1043
214.8
P10809_1062
325.1
P10809_1083
161.6
P10809_1097
129.0
Memory CD4 T-cell nTPM: 56.3
Samples: 6
Max nTPM: 205.9
Min nTPM: 20.1
P10809_1014
20.9
P10809_1026
23.0
P10809_1045
30.9
P10809_1064
205.9
P10809_1086
36.9
P10809_1113
20.1
Memory CD8 T-cell nTPM: 299.0
Samples: 5
Max nTPM: 418.7
Min nTPM: 182.8
P10809_1012
228.7
P10809_1027
411.6
P10809_1046
182.8
P10809_1065
418.7
P10809_1111
253.4
Naive CD4 T-cell nTPM: 10.9
Samples: 6
Max nTPM: 27.0
Min nTPM: 2.2
P10809_1015
13.6
P10809_1030
2.6
P10809_1049
4.8
P10809_1068
15.4
P10809_1085
27.0
P10809_1112
2.2
Naive CD8 T-cell nTPM: 184.9
Samples: 6
Max nTPM: 489.2
Min nTPM: 44.2
P10809_1016
44.2
P10809_1031
200.1
P10809_1050
86.7
P10809_1069
489.2
P10809_1087
203.7
P10809_1110
85.6
T-reg nTPM: 1.1
Samples: 6
Max nTPM: 2.4
Min nTPM: 0.0
P10809_1018
1.1
P10809_1037
1.5
P10809_1056
0.0
P10809_1075
2.4
P10809_1094
1.3
P10809_1106
0.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
3205.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 350.3
Samples: 4
Max nTPM: 460.5
Min nTPM: 270.2
RHH5202_R3573
378.3
RHH5230_R3602
292.1
RHH5259_R3631
270.2
RHH5288_R3660
460.5
Effector memory CD8 T-cell nTPM: 1237.2
Samples: 4
Max nTPM: 2182.1
Min nTPM: 721.1
RHH5203_R3574
1138.9
RHH5231_R3603
906.7
RHH5260_R3632
721.1
RHH5289_R3661
2182.1
MAIT T-cell nTPM: 1106.2
Samples: 4
Max nTPM: 1369.3
Min nTPM: 833.4
RHH5233_R3605
918.1
RHH5205_R3576
833.4
RHH5262_R3634
1303.8
RHH5297_R3663
1369.3
Memory CD4 T-cell TFH nTPM: 57.3
Samples: 4
Max nTPM: 72.1
Min nTPM: 40.9
RHH5300_R3666
72.1
RHH5236_R3608
40.9
RHH5265_R3637
57.6
RHH5208_R3579
58.4
Memory CD4 T-cell Th1 nTPM: 145.8
Samples: 4
Max nTPM: 177.8
Min nTPM: 120.5
RHH5210_R3581
120.5
RHH5302_R3668
177.8
RHH5238_R3610
140.4
RHH5267_R3639
144.3
Memory CD4 T-cell Th1/Th17 nTPM: 171.3
Samples: 4
Max nTPM: 260.8
Min nTPM: 114.9
RHH5303_R3669
260.8
RHH5211_R3582
155.2
RHH5239_R3611
114.9
RHH5268_R3640
154.2
Memory CD4 T-cell Th17 nTPM: 137.0
Samples: 4
Max nTPM: 314.0
Min nTPM: 52.3
RHH5304_R3670
314.0
RHH5212_R3583
83.6
RHH5240_R3612
52.3
RHH5269_R3641
98.1
Memory CD4 T-cell Th2 nTPM: 103.4
Samples: 4
Max nTPM: 145.8
Min nTPM: 63.6
RHH5305_R3671
124.3
RHH5213_R3584
79.9
RHH5241_R3613
63.6
RHH5270_R3642
145.8
Naive CD4 T-cell nTPM: 77.2
Samples: 4
Max nTPM: 140.7
Min nTPM: 46.0
RHH5306_R3672
63.2
RHH5214_R3585
46.0
RHH5242_R3614
140.7
RHH5271_R3643
58.9
Naive CD8 T-cell nTPM: 48.2
Samples: 4
Max nTPM: 67.0
Min nTPM: 37.2
RHH5201_R3572
51.1
RHH5229_R3601
37.4
RHH5258_R3630
67.0
RHH5287_R3659
37.2
Non-Vd2 gdTCR nTPM: 3205.6
Samples: 4
Max nTPM: 4364.9
Min nTPM: 2418.5
RHH5235_R3607
2418.5
RHH5264_R3636
3251.1
RHH5207_R3578
4364.9
RHH5299_R3665
2788.0
T-reg nTPM: 46.2
Samples: 4
Max nTPM: 55.5
Min nTPM: 35.2
RHH5301_R3667
54.8
RHH5237_R3609
35.2
RHH5266_R3638
39.1
RHH5209_R3580
55.5
Terminal effector memory CD4 T-cell nTPM: 1636.3
Samples: 2
Max nTPM: 2981.5
Min nTPM: 291.1
RHH5243_R3615
2981.5
RHH5272_R3644
291.1
Terminal effector memory CD8 T-cell nTPM: 2150.9
Samples: 4
Max nTPM: 4686.4
Min nTPM: 736.2
RHH5232_R3604
736.2
RHH5204_R3575
1627.4
RHH5261_R3633
1553.7
RHH5296_R3662
4686.4
Vd2 gdTCR nTPM: 1712.6
Samples: 4
Max nTPM: 2122.7
Min nTPM: 1360.8
RHH5234_R3606
1360.8
RHH5206_R3577
2122.7
RHH5263_R3635
1438.0
RHH5298_R3664
1929.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
