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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
937.6
nTPM
Monaco:
598.1
nTPM
Schmiedel:
1145.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
937.6
HPA sample
nTPM
gdT-cell nTPM: 97.1
Samples: 6
Max nTPM: 141.4
Min nTPM: 27.2
P10809_1007
138.9
P10809_1022
61.9
P10809_1041
141.4
P10809_1060
27.2
P10809_1077
75.8
P10809_1098
137.6
MAIT T-cell nTPM: 649.4
Samples: 6
Max nTPM: 1114.1
Min nTPM: 217.7
P10809_1006
841.8
P10809_1024
217.7
P10809_1043
782.6
P10809_1062
322.1
P10809_1083
618.1
P10809_1097
1114.1
Memory CD4 T-cell nTPM: 937.6
Samples: 6
Max nTPM: 1595.4
Min nTPM: 286.4
P10809_1014
1407.1
P10809_1026
1595.4
P10809_1045
1226.9
P10809_1064
819.5
P10809_1086
290.5
P10809_1113
286.4
Memory CD8 T-cell nTPM: 417.1
Samples: 5
Max nTPM: 759.5
Min nTPM: 140.1
P10809_1012
759.5
P10809_1027
140.1
P10809_1046
592.1
P10809_1065
242.4
P10809_1111
351.3
Naive CD4 T-cell nTPM: 727.2
Samples: 6
Max nTPM: 1147.1
Min nTPM: 545.0
P10809_1015
553.7
P10809_1030
804.5
P10809_1049
1147.1
P10809_1068
658.9
P10809_1085
653.8
P10809_1112
545.0
Naive CD8 T-cell nTPM: 321.8
Samples: 6
Max nTPM: 514.0
Min nTPM: 21.2
P10809_1016
363.3
P10809_1031
473.5
P10809_1050
287.6
P10809_1069
271.2
P10809_1087
21.2
P10809_1110
514.0
T-reg nTPM: 672.3
Samples: 6
Max nTPM: 2003.3
Min nTPM: 181.1
P10809_1018
403.7
P10809_1037
503.2
P10809_1056
2003.3
P10809_1075
526.5
P10809_1094
181.1
P10809_1106
416.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
598.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 152.1
Samples: 4
Max nTPM: 278.4
Min nTPM: 59.9
RHH5202_R3573
59.9
RHH5230_R3602
278.4
RHH5259_R3631
182.0
RHH5288_R3660
87.9
Effector memory CD8 T-cell nTPM: 28.0
Samples: 4
Max nTPM: 69.9
Min nTPM: 7.1
RHH5203_R3574
19.7
RHH5231_R3603
69.9
RHH5260_R3632
15.4
RHH5289_R3661
7.1
MAIT T-cell nTPM: 173.1
Samples: 4
Max nTPM: 261.6
Min nTPM: 128.8
RHH5233_R3605
150.5
RHH5205_R3576
128.8
RHH5262_R3634
261.6
RHH5297_R3663
151.6
Memory CD4 T-cell TFH nTPM: 598.1
Samples: 4
Max nTPM: 1548.7
Min nTPM: 124.4
RHH5300_R3666
510.5
RHH5236_R3608
1548.7
RHH5265_R3637
208.8
RHH5208_R3579
124.4
Memory CD4 T-cell Th1 nTPM: 272.8
Samples: 4
Max nTPM: 425.1
Min nTPM: 112.8
RHH5210_R3581
112.8
RHH5302_R3668
187.0
RHH5238_R3610
425.1
RHH5267_R3639
366.4
Memory CD4 T-cell Th1/Th17 nTPM: 319.8
Samples: 4
Max nTPM: 543.2
Min nTPM: 117.2
RHH5303_R3669
117.2
RHH5211_R3582
422.2
RHH5239_R3611
196.7
RHH5268_R3640
543.2
Memory CD4 T-cell Th17 nTPM: 309.7
Samples: 4
Max nTPM: 629.5
Min nTPM: 93.5
RHH5304_R3670
93.5
RHH5212_R3583
629.5
RHH5240_R3612
137.1
RHH5269_R3641
378.6
Memory CD4 T-cell Th2 nTPM: 228.1
Samples: 4
Max nTPM: 366.9
Min nTPM: 126.9
RHH5305_R3671
248.5
RHH5213_R3584
126.9
RHH5241_R3613
170.1
RHH5270_R3642
366.9
Naive CD4 T-cell nTPM: 300.4
Samples: 4
Max nTPM: 527.9
Min nTPM: 139.1
RHH5306_R3672
276.3
RHH5214_R3585
527.9
RHH5242_R3614
139.1
RHH5271_R3643
258.4
Naive CD8 T-cell nTPM: 119.8
Samples: 4
Max nTPM: 193.1
Min nTPM: 2.9
RHH5201_R3572
2.9
RHH5229_R3601
193.1
RHH5258_R3630
158.1
RHH5287_R3659
124.9
Non-Vd2 gdTCR nTPM: 23.8
Samples: 4
Max nTPM: 36.2
Min nTPM: 0.7
RHH5235_R3607
34.7
RHH5264_R3636
23.6
RHH5207_R3578
0.7
RHH5299_R3665
36.2
T-reg nTPM: 315.0
Samples: 4
Max nTPM: 592.3
Min nTPM: 180.6
RHH5301_R3667
234.9
RHH5237_R3609
592.3
RHH5266_R3638
180.6
RHH5209_R3580
252.1
Terminal effector memory CD4 T-cell nTPM: 21.2
Samples: 2
Max nTPM: 23.6
Min nTPM: 18.7
RHH5243_R3615
23.6
RHH5272_R3644
18.7
Terminal effector memory CD8 T-cell nTPM: 22.2
Samples: 4
Max nTPM: 45.6
Min nTPM: 6.3
RHH5232_R3604
6.3
RHH5204_R3575
22.6
RHH5261_R3633
45.6
RHH5296_R3662
14.3
Vd2 gdTCR nTPM: 84.9
Samples: 4
Max nTPM: 139.1
Min nTPM: 33.8
RHH5234_R3606
88.4
RHH5206_R3577
33.8
RHH5263_R3635
78.1
RHH5298_R3664
139.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
