HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:35.6 nTPM
HPA Brain:26.4 nTPM
GTEx:35.6 nTPM
FANTOM5:22.7 Scaled Tags Per Million
Pig:13.4 nTPM
Mouse:5.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043279Antibody HPA047026
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.4
Sample id Sample description nTPM
Hippocampus
nTPM: 26.4
1898 Male, age 80, left hemisphere 30.8
2621 Female, age 67, right hemisphere 29.8
1855 Male, age 76, left hemisphere 27.2
2148 Female, age 91, left hemisphere 23.8
1911 Female, age 85, right hemisphere 23.5
2529 Female, age 94, left hemisphere 23.1
Dentate gyrus
nTPM: 26.3
2530 Female, age 94, left hemisphere 33.9
2010 Male, age 76, both hemispheres 28.7
1927 Female, age 91, both hemispheres 25.1
2528 Male, age 74, both hemispheres 24.4
2531 Female, age 67, both hemispheres 24.0
2246 Female, age 85, both hemispheres 21.7
Entorhinal gyrus
nTPM: 24.7
2117 Female, age 91, right hemisphere 27.5
2764 Male, age 80, right hemisphere 26.4
1787 Male, age 76, left hemisphere 26.1
2613 Female, age 94, left hemisphere 24.8
1938 Female, age 85, left hemisphere 23.7
2686 Male, age 75, right hemisphere 19.6
Hippocampus, CA1
nTPM: 24.5
2749 Male, age 80, left hemisphere 38.0
1873 Female, age 85, both hemispheres 24.2
2527 Male, age 74, both hemispheres 22.5
2045 Male, age 76, both hemispheres 19.5
2082 Female, age 91, right hemisphere 18.3
Hippocampus, CA2
nTPM: 24.8
1963 Male, age 80, left hemisphere 33.7
2437 Female, age 94, left hemisphere 26.0
1892 Male, age 76, both hemispheres 24.9
2249 Male, age 74, both hemispheres 24.9
1940 Female, age 85, left hemisphere 20.7
2113 Female, age 91, right hemisphere 18.5
Hippocampus, CA3
nTPM: 24.2
2436 Male, age 74, both hemispheres 26.2
2861 Female, age 67, both hemispheres 26.1
2137 Male, age 80, left hemisphere 25.7
1867 Male, age 76, both hemispheres 24.8
2620 Female, age 94, left hemisphere 22.9
1891 Female, age 85, both hemispheres 19.5
Parahippocampal cortex
nTPM: 20.7
2532 Female, age 72, left hemisphere 24.4
1990 Female, age 91, right hemisphere 22.7
2018 Male, age 76, both hemispheres 22.3
2245 Female, age 91, both hemispheres 21.1
2692 Male, age 74, both hemispheres 21.1
2622 Female, age 67, right hemisphere 20.8
1850 Male, age 80, both hemispheres 20.0
1933 Female, age 85, both hemispheres 19.9
2250 Female, age 67, right hemisphere 19.0
2693 Female, age 94, both hemispheres 15.9
Perirhinal gyrus
nTPM: 20.3
1794 Male, age 80, right hemisphere 24.7
1847 Female, age 91, left hemisphere 23.0
2521 Female, age 94, right hemisphere 20.6
1841 Female, age 85, right hemisphere 17.0
2848 Male, age 76, right hemisphere 16.2
Subiculum
nTPM: 23.6
2042 Male, age 76, both hemispheres 26.8
2619 Male, age 74, both hemispheres 26.7
1901 Male, age 80, both hemispheres 24.4
1977 Female, age 85, both hemispheres 23.5
2729 Female, age 91, right hemisphere 23.2
2438 Female, age 94, left hemisphere 16.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.6
Samples: 197

Max nTPM: 76.9
Min nTPM: 15.5
Std nTPM: 9.9
Median nTPM: 35.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 76.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 74.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 71.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 68.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 59.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 59.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 58.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 54.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 52.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 51.5
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 51.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.7
FF:10169-103B7 60 years, female 23.8
FF:10153-102I9 76 years, female 21.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.4
Pig sample Sample description nTPM
Subiculum
nTPM: 12.0
Samples: 4

Max nTPM: 14.7
Min nTPM: 9.8
Sample A Female 14.7
Sample B Female 12.6
Sample C Male 10.9
Sample D Male 9.8
Dorsal hippocampus
nTPM: 13.4
Samples: 4

Max nTPM: 17.0
Min nTPM: 11.8
Sample A Female 17.0
Sample B Female 12.7
Sample C Male 11.9
Sample D Male 11.8
Entorhinal cortex
nTPM: 11.7
Samples: 4

Max nTPM: 13.0
Min nTPM: 10.0
Sample A Female 11.5
Sample B Female 13.0
Sample C Male 12.4
Sample D Male 10.0
Ventral hippocampus
nTPM: 13.4
Samples: 4

Max nTPM: 15.2
Min nTPM: 11.2
Sample A Female 15.2
Sample B Female 11.2
Sample C Male 15.1
Sample D Male 12.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.7
Samples: 4

Max nTPM: 6.1
Min nTPM: 2.5
Sample A Male 4.8
Sample B Male 6.1
Sample C Female 5.4
Sample D Female 2.5
Hippocampal formation
nTPM: 5.8
Samples: 4

Max nTPM: 6.6
Min nTPM: 5.3
Sample A Male 5.7
Sample B Male 5.7
Sample C Female 5.3
Sample D Female 6.6

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