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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
121.9
nTPM
Monaco:
44.3
nTPM
Schmiedel:
31.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
121.9
HPA sample
nTPM
gdT-cell nTPM: 108.0
Samples: 6
Max nTPM: 133.1
Min nTPM: 82.4
P10809_1007
82.4
P10809_1022
133.1
P10809_1041
124.2
P10809_1060
96.3
P10809_1077
96.7
P10809_1098
115.3
MAIT T-cell nTPM: 106.8
Samples: 6
Max nTPM: 128.9
Min nTPM: 79.8
P10809_1006
79.8
P10809_1024
101.6
P10809_1043
112.2
P10809_1062
108.3
P10809_1083
110.0
P10809_1097
128.9
Memory CD4 T-cell nTPM: 115.3
Samples: 6
Max nTPM: 157.5
Min nTPM: 75.4
P10809_1014
75.4
P10809_1026
157.5
P10809_1045
124.3
P10809_1064
111.7
P10809_1086
90.2
P10809_1113
132.4
Memory CD8 T-cell nTPM: 114.3
Samples: 5
Max nTPM: 140.8
Min nTPM: 85.5
P10809_1012
85.5
P10809_1027
108.6
P10809_1046
140.8
P10809_1065
103.1
P10809_1111
133.3
Naive CD4 T-cell nTPM: 106.5
Samples: 6
Max nTPM: 129.6
Min nTPM: 70.3
P10809_1015
70.3
P10809_1030
120.6
P10809_1049
129.6
P10809_1068
104.9
P10809_1085
87.2
P10809_1112
126.5
Naive CD8 T-cell nTPM: 109.3
Samples: 6
Max nTPM: 124.0
Min nTPM: 89.2
P10809_1016
96.8
P10809_1031
110.2
P10809_1050
115.4
P10809_1069
120.3
P10809_1087
89.2
P10809_1110
124.0
T-reg nTPM: 121.9
Samples: 6
Max nTPM: 172.1
Min nTPM: 81.9
P10809_1018
81.9
P10809_1037
93.8
P10809_1056
157.5
P10809_1075
113.2
P10809_1094
172.1
P10809_1106
112.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
44.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 22.6
Samples: 4
Max nTPM: 34.4
Min nTPM: 2.6
RHH5202_R3573
2.6
RHH5230_R3602
20.0
RHH5259_R3631
33.2
RHH5288_R3660
34.4
Effector memory CD8 T-cell nTPM: 20.4
Samples: 4
Max nTPM: 36.1
Min nTPM: 3.3
RHH5203_R3574
13.1
RHH5231_R3603
29.2
RHH5260_R3632
36.1
RHH5289_R3661
3.3
MAIT T-cell nTPM: 25.6
Samples: 4
Max nTPM: 48.9
Min nTPM: 2.5
RHH5233_R3605
2.5
RHH5205_R3576
14.7
RHH5262_R3634
36.2
RHH5297_R3663
48.9
Memory CD4 T-cell TFH nTPM: 29.7
Samples: 4
Max nTPM: 52.6
Min nTPM: 0.6
RHH5300_R3666
36.3
RHH5236_R3608
52.6
RHH5265_R3637
29.1
RHH5208_R3579
0.6
Memory CD4 T-cell Th1 nTPM: 40.7
Samples: 4
Max nTPM: 68.7
Min nTPM: 24.1
RHH5210_R3581
33.3
RHH5302_R3668
68.7
RHH5238_R3610
36.7
RHH5267_R3639
24.1
Memory CD4 T-cell Th1/Th17 nTPM: 25.5
Samples: 4
Max nTPM: 42.0
Min nTPM: 4.9
RHH5303_R3669
4.9
RHH5211_R3582
42.0
RHH5239_R3611
17.8
RHH5268_R3640
37.1
Memory CD4 T-cell Th17 nTPM: 16.2
Samples: 4
Max nTPM: 32.1
Min nTPM: 2.4
RHH5304_R3670
11.0
RHH5212_R3583
32.1
RHH5240_R3612
2.4
RHH5269_R3641
19.1
Memory CD4 T-cell Th2 nTPM: 22.3
Samples: 4
Max nTPM: 36.5
Min nTPM: 8.7
RHH5305_R3671
36.5
RHH5213_R3584
23.2
RHH5241_R3613
8.7
RHH5270_R3642
20.6
Naive CD4 T-cell nTPM: 32.4
Samples: 4
Max nTPM: 55.6
Min nTPM: 22.1
RHH5306_R3672
27.6
RHH5214_R3585
55.6
RHH5242_R3614
22.1
RHH5271_R3643
24.2
Naive CD8 T-cell nTPM: 21.9
Samples: 4
Max nTPM: 41.4
Min nTPM: 2.6
RHH5201_R3572
2.6
RHH5229_R3601
14.7
RHH5258_R3630
41.4
RHH5287_R3659
28.7
Non-Vd2 gdTCR nTPM: 25.2
Samples: 4
Max nTPM: 57.4
Min nTPM: 4.7
RHH5235_R3607
29.8
RHH5264_R3636
4.7
RHH5207_R3578
8.7
RHH5299_R3665
57.4
T-reg nTPM: 35.6
Samples: 4
Max nTPM: 52.4
Min nTPM: 29.0
RHH5301_R3667
52.4
RHH5237_R3609
29.9
RHH5266_R3638
29.0
RHH5209_R3580
31.0
Terminal effector memory CD4 T-cell nTPM: 20.4
Samples: 2
Max nTPM: 22.4
Min nTPM: 18.4
RHH5243_R3615
22.4
RHH5272_R3644
18.4
Terminal effector memory CD8 T-cell nTPM: 34.8
Samples: 4
Max nTPM: 74.6
Min nTPM: 13.0
RHH5232_R3604
22.2
RHH5204_R3575
74.6
RHH5261_R3633
29.5
RHH5296_R3662
13.0
Vd2 gdTCR nTPM: 44.3
Samples: 4
Max nTPM: 58.8
Min nTPM: 31.3
RHH5234_R3606
31.4
RHH5206_R3577
58.8
RHH5263_R3635
31.3
RHH5298_R3664
55.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
