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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1825.2
nTPM
Monaco:
233.5
nTPM
Schmiedel:
331.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1825.2
HPA sample
nTPM
gdT-cell nTPM: 1342.0
Samples: 6
Max nTPM: 1714.3
Min nTPM: 1115.3
P10809_1007
1151.3
P10809_1022
1274.5
P10809_1041
1714.3
P10809_1060
1115.3
P10809_1077
1498.5
P10809_1098
1298.1
MAIT T-cell nTPM: 1562.1
Samples: 6
Max nTPM: 1836.2
Min nTPM: 999.7
P10809_1006
999.7
P10809_1024
1750.3
P10809_1043
1836.2
P10809_1062
1609.6
P10809_1083
1367.0
P10809_1097
1810.0
Memory CD4 T-cell nTPM: 1758.4
Samples: 6
Max nTPM: 2205.6
Min nTPM: 1379.9
P10809_1014
1379.9
P10809_1026
2205.6
P10809_1045
1770.2
P10809_1064
1723.6
P10809_1086
1711.3
P10809_1113
1759.6
Memory CD8 T-cell nTPM: 1470.1
Samples: 5
Max nTPM: 1651.9
Min nTPM: 1166.0
P10809_1012
1166.0
P10809_1027
1608.8
P10809_1046
1651.9
P10809_1065
1473.9
P10809_1111
1449.9
Naive CD4 T-cell nTPM: 1612.7
Samples: 6
Max nTPM: 2039.9
Min nTPM: 1275.0
P10809_1015
1275.0
P10809_1030
2039.9
P10809_1049
1715.8
P10809_1068
1698.7
P10809_1085
1452.5
P10809_1112
1494.3
Naive CD8 T-cell nTPM: 1556.9
Samples: 6
Max nTPM: 1817.3
Min nTPM: 1404.4
P10809_1016
1532.0
P10809_1031
1817.3
P10809_1050
1489.8
P10809_1069
1611.9
P10809_1087
1485.8
P10809_1110
1404.4
T-reg nTPM: 1825.2
Samples: 6
Max nTPM: 2035.5
Min nTPM: 1385.5
P10809_1018
1385.5
P10809_1037
2035.5
P10809_1056
1881.0
P10809_1075
1921.9
P10809_1094
1971.3
P10809_1106
1755.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
233.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 155.1
Samples: 4
Max nTPM: 276.1
Min nTPM: 84.6
RHH5202_R3573
84.6
RHH5230_R3602
164.3
RHH5259_R3631
276.1
RHH5288_R3660
95.2
Effector memory CD8 T-cell nTPM: 113.5
Samples: 4
Max nTPM: 225.8
Min nTPM: 65.5
RHH5203_R3574
65.5
RHH5231_R3603
74.8
RHH5260_R3632
225.8
RHH5289_R3661
87.7
MAIT T-cell nTPM: 144.7
Samples: 4
Max nTPM: 195.0
Min nTPM: 66.4
RHH5233_R3605
66.4
RHH5205_R3576
191.4
RHH5262_R3634
195.0
RHH5297_R3663
126.0
Memory CD4 T-cell TFH nTPM: 103.9
Samples: 4
Max nTPM: 155.1
Min nTPM: 63.9
RHH5300_R3666
96.6
RHH5236_R3608
155.1
RHH5265_R3637
100.0
RHH5208_R3579
63.9
Memory CD4 T-cell Th1 nTPM: 180.6
Samples: 4
Max nTPM: 326.6
Min nTPM: 56.9
RHH5210_R3581
56.9
RHH5302_R3668
143.4
RHH5238_R3610
326.6
RHH5267_R3639
195.4
Memory CD4 T-cell Th1/Th17 nTPM: 154.7
Samples: 4
Max nTPM: 209.8
Min nTPM: 85.2
RHH5303_R3669
116.0
RHH5211_R3582
85.2
RHH5239_R3611
209.8
RHH5268_R3640
207.9
Memory CD4 T-cell Th17 nTPM: 182.8
Samples: 4
Max nTPM: 241.0
Min nTPM: 112.5
RHH5304_R3670
241.0
RHH5212_R3583
112.5
RHH5240_R3612
202.7
RHH5269_R3641
174.9
Memory CD4 T-cell Th2 nTPM: 154.9
Samples: 4
Max nTPM: 238.6
Min nTPM: 90.1
RHH5305_R3671
238.6
RHH5213_R3584
136.0
RHH5241_R3613
90.1
RHH5270_R3642
154.8
Naive CD4 T-cell nTPM: 157.2
Samples: 4
Max nTPM: 190.1
Min nTPM: 116.9
RHH5306_R3672
161.9
RHH5214_R3585
190.1
RHH5242_R3614
116.9
RHH5271_R3643
159.7
Naive CD8 T-cell nTPM: 155.2
Samples: 4
Max nTPM: 254.2
Min nTPM: 66.0
RHH5201_R3572
66.0
RHH5229_R3601
254.2
RHH5258_R3630
101.2
RHH5287_R3659
199.5
Non-Vd2 gdTCR nTPM: 139.4
Samples: 4
Max nTPM: 179.6
Min nTPM: 120.6
RHH5235_R3607
179.6
RHH5264_R3636
128.1
RHH5207_R3578
120.6
RHH5299_R3665
129.2
T-reg nTPM: 139.9
Samples: 4
Max nTPM: 191.8
Min nTPM: 95.8
RHH5301_R3667
116.7
RHH5237_R3609
95.8
RHH5266_R3638
191.8
RHH5209_R3580
155.1
Terminal effector memory CD4 T-cell nTPM: 134.5
Samples: 2
Max nTPM: 174.2
Min nTPM: 94.7
RHH5243_R3615
174.2
RHH5272_R3644
94.7
Terminal effector memory CD8 T-cell nTPM: 156.7
Samples: 4
Max nTPM: 252.8
Min nTPM: 51.6
RHH5232_R3604
51.6
RHH5204_R3575
198.6
RHH5261_R3633
252.8
RHH5296_R3662
123.8
Vd2 gdTCR nTPM: 233.5
Samples: 4
Max nTPM: 358.7
Min nTPM: 139.0
RHH5234_R3606
139.0
RHH5206_R3577
358.7
RHH5263_R3635
256.2
RHH5298_R3664
180.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
