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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
127.2
nTPM
Monaco:
276.8
nTPM
Schmiedel:
85.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
127.2
HPA sample
nTPM
gdT-cell nTPM: 91.6
Samples: 6
Max nTPM: 179.1
Min nTPM: 4.5
P10809_1007
76.0
P10809_1022
179.1
P10809_1041
97.4
P10809_1060
72.8
P10809_1077
119.7
P10809_1098
4.5
MAIT T-cell nTPM: 24.8
Samples: 6
Max nTPM: 51.2
Min nTPM: 4.0
P10809_1006
15.8
P10809_1024
48.8
P10809_1043
11.5
P10809_1062
17.5
P10809_1083
51.2
P10809_1097
4.0
Memory CD4 T-cell nTPM: 41.6
Samples: 6
Max nTPM: 68.9
Min nTPM: 2.2
P10809_1014
29.9
P10809_1026
41.8
P10809_1045
45.6
P10809_1064
61.4
P10809_1086
68.9
P10809_1113
2.2
Memory CD8 T-cell nTPM: 98.0
Samples: 5
Max nTPM: 153.4
Min nTPM: 11.6
P10809_1012
87.9
P10809_1027
153.4
P10809_1046
127.4
P10809_1065
109.7
P10809_1111
11.6
Naive CD4 T-cell nTPM: 17.4
Samples: 6
Max nTPM: 41.0
Min nTPM: 8.7
P10809_1015
9.4
P10809_1030
12.3
P10809_1049
23.8
P10809_1068
9.3
P10809_1085
41.0
P10809_1112
8.7
Naive CD8 T-cell nTPM: 61.5
Samples: 6
Max nTPM: 128.8
Min nTPM: 1.2
P10809_1016
23.4
P10809_1031
76.7
P10809_1050
69.3
P10809_1069
69.6
P10809_1087
128.8
P10809_1110
1.2
T-reg nTPM: 127.2
Samples: 6
Max nTPM: 181.9
Min nTPM: 3.8
P10809_1018
115.6
P10809_1037
167.5
P10809_1056
181.9
P10809_1075
130.9
P10809_1094
163.7
P10809_1106
3.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
276.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 104.7
Samples: 4
Max nTPM: 189.9
Min nTPM: 2.5
RHH5202_R3573
126.9
RHH5230_R3602
2.5
RHH5259_R3631
99.3
RHH5288_R3660
189.9
Effector memory CD8 T-cell nTPM: 224.5
Samples: 4
Max nTPM: 360.4
Min nTPM: 22.4
RHH5203_R3574
360.4
RHH5231_R3603
22.4
RHH5260_R3632
168.5
RHH5289_R3661
346.5
MAIT T-cell nTPM: 64.8
Samples: 4
Max nTPM: 113.3
Min nTPM: 3.4
RHH5233_R3605
3.4
RHH5205_R3576
41.5
RHH5262_R3634
113.3
RHH5297_R3663
101.0
Memory CD4 T-cell TFH nTPM: 30.9
Samples: 4
Max nTPM: 40.5
Min nTPM: 4.7
RHH5300_R3666
40.5
RHH5236_R3608
4.7
RHH5265_R3637
38.2
RHH5208_R3579
40.0
Memory CD4 T-cell Th1 nTPM: 61.9
Samples: 4
Max nTPM: 130.4
Min nTPM: 0.9
RHH5210_R3581
58.1
RHH5302_R3668
130.4
RHH5238_R3610
0.9
RHH5267_R3639
58.3
Memory CD4 T-cell Th1/Th17 nTPM: 66.2
Samples: 4
Max nTPM: 129.8
Min nTPM: 2.5
RHH5303_R3669
129.8
RHH5211_R3582
76.5
RHH5239_R3611
2.5
RHH5268_R3640
55.9
Memory CD4 T-cell Th17 nTPM: 26.1
Samples: 4
Max nTPM: 58.8
Min nTPM: 0.2
RHH5304_R3670
22.4
RHH5212_R3583
58.8
RHH5240_R3612
0.2
RHH5269_R3641
22.8
Memory CD4 T-cell Th2 nTPM: 48.4
Samples: 4
Max nTPM: 70.9
Min nTPM: 1.1
RHH5305_R3671
70.9
RHH5213_R3584
60.4
RHH5241_R3613
1.1
RHH5270_R3642
61.3
Naive CD4 T-cell nTPM: 22.7
Samples: 4
Max nTPM: 32.9
Min nTPM: 1.8
RHH5306_R3672
28.6
RHH5214_R3585
32.9
RHH5242_R3614
1.8
RHH5271_R3643
27.4
Naive CD8 T-cell nTPM: 28.2
Samples: 4
Max nTPM: 56.2
Min nTPM: 0.8
RHH5201_R3572
32.1
RHH5229_R3601
0.8
RHH5258_R3630
56.2
RHH5287_R3659
23.8
Non-Vd2 gdTCR nTPM: 204.4
Samples: 4
Max nTPM: 310.1
Min nTPM: 8.4
RHH5235_R3607
8.4
RHH5264_R3636
299.4
RHH5207_R3578
199.6
RHH5299_R3665
310.1
T-reg nTPM: 56.3
Samples: 4
Max nTPM: 137.7
Min nTPM: 2.4
RHH5301_R3667
137.7
RHH5237_R3609
2.4
RHH5266_R3638
39.6
RHH5209_R3580
45.5
Terminal effector memory CD4 T-cell nTPM: 117.9
Samples: 2
Max nTPM: 230.3
Min nTPM: 5.4
RHH5243_R3615
5.4
RHH5272_R3644
230.3
Terminal effector memory CD8 T-cell nTPM: 276.9
Samples: 4
Max nTPM: 442.4
Min nTPM: 8.3
RHH5232_R3604
8.3
RHH5204_R3575
442.4
RHH5261_R3633
220.2
RHH5296_R3662
436.5
Vd2 gdTCR nTPM: 210.9
Samples: 4
Max nTPM: 425.4
Min nTPM: 7.4
RHH5234_R3606
7.4
RHH5206_R3577
425.4
RHH5263_R3635
164.4
RHH5298_R3664
246.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
