HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:14.5 nTPM
HPA Brain:5.4 nTPM
GTEx:14.5 nTPM
FANTOM5:42.7 Scaled Tags Per Million
Pig:17.9 nTPM
Mouse:0.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047716
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 5.4
Sample id Sample description nTPM
Hippocampus
nTPM: 4.5
2529 Female, age 94, left hemisphere 6.5
1898 Male, age 80, left hemisphere 5.4
1911 Female, age 85, right hemisphere 4.7
1855 Male, age 76, left hemisphere 4.0
2148 Female, age 91, left hemisphere 3.5
2621 Female, age 67, right hemisphere 2.7
Dentate gyrus
nTPM: 5.3
2530 Female, age 94, left hemisphere 7.4
2246 Female, age 85, both hemispheres 5.2
2531 Female, age 67, both hemispheres 5.2
1927 Female, age 91, both hemispheres 5.1
2010 Male, age 76, both hemispheres 4.7
2528 Male, age 74, both hemispheres 4.4
Entorhinal gyrus
nTPM: 4.8
1938 Female, age 85, left hemisphere 5.9
2764 Male, age 80, right hemisphere 5.7
2117 Female, age 91, right hemisphere 4.9
1787 Male, age 76, left hemisphere 4.7
2613 Female, age 94, left hemisphere 4.0
2686 Male, age 75, right hemisphere 3.4
Hippocampus, CA1
nTPM: 4.6
2749 Male, age 80, left hemisphere 5.7
2527 Male, age 74, both hemispheres 5.0
1873 Female, age 85, both hemispheres 4.7
2045 Male, age 76, both hemispheres 4.0
2082 Female, age 91, right hemisphere 3.6
Hippocampus, CA2
nTPM: 5.4
2437 Female, age 94, left hemisphere 6.0
1892 Male, age 76, both hemispheres 5.8
2249 Male, age 74, both hemispheres 5.7
1963 Male, age 80, left hemisphere 5.6
1940 Female, age 85, left hemisphere 5.3
2113 Female, age 91, right hemisphere 4.2
Hippocampus, CA3
nTPM: 4.2
1867 Male, age 76, both hemispheres 6.1
1891 Female, age 85, both hemispheres 5.4
2436 Male, age 74, both hemispheres 4.7
2137 Male, age 80, left hemisphere 4.6
2620 Female, age 94, left hemisphere 2.6
2861 Female, age 67, both hemispheres 2.1
Parahippocampal cortex
nTPM: 4.5
1933 Female, age 85, both hemispheres 6.6
1850 Male, age 80, both hemispheres 6.5
1990 Female, age 91, right hemisphere 5.1
2018 Male, age 76, both hemispheres 5.1
2250 Female, age 67, right hemisphere 4.3
2692 Male, age 74, both hemispheres 4.3
2245 Female, age 91, both hemispheres 4.2
2693 Female, age 94, both hemispheres 3.4
2532 Female, age 72, left hemisphere 3.2
2622 Female, age 67, right hemisphere 2.0
Perirhinal gyrus
nTPM: 5.3
1841 Female, age 85, right hemisphere 7.0
1794 Male, age 80, right hemisphere 5.6
2848 Male, age 76, right hemisphere 5.1
1847 Female, age 91, left hemisphere 4.5
2521 Female, age 94, right hemisphere 4.5
Subiculum
nTPM: 4.3
1977 Female, age 85, both hemispheres 6.1
1901 Male, age 80, both hemispheres 5.9
2042 Male, age 76, both hemispheres 4.4
2729 Female, age 91, right hemisphere 4.1
2619 Male, age 74, both hemispheres 3.5
2438 Female, age 94, left hemisphere 1.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.5
Samples: 197

Max nTPM: 42.6
Min nTPM: 7.1
Std nTPM: 4.0
Median nTPM: 14.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 42.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 28.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 26.8
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 24.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 24.0
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 22.5
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 22.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 22.0
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 21.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 20.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 20.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.7
FF:10169-103B7 60 years, female 58.1
FF:10153-102I9 76 years, female 27.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.9
Pig sample Sample description nTPM
Subiculum
nTPM: 17.9
Samples: 4

Max nTPM: 22.8
Min nTPM: 15.4
Sample A Female 22.8
Sample B Female 17.8
Sample C Male 15.6
Sample D Male 15.4
Dorsal hippocampus
nTPM: 16.6
Samples: 4

Max nTPM: 19.7
Min nTPM: 14.5
Sample A Female 19.7
Sample B Female 16.0
Sample C Male 16.3
Sample D Male 14.5
Entorhinal cortex
nTPM: 16.1
Samples: 4

Max nTPM: 18.3
Min nTPM: 14.4
Sample A Female 16.0
Sample B Female 18.3
Sample C Male 14.4
Sample D Male 15.5
Ventral hippocampus
nTPM: 15.3
Samples: 4

Max nTPM: 17.0
Min nTPM: 14.1
Sample A Female 15.4
Sample B Female 14.1
Sample C Male 17.0
Sample D Male 14.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.3
Samples: 4

Max nTPM: 1.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 1.0
Hippocampal formation
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0

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