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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
148.1
nTPM
Monaco:
1440.4
nTPM
Schmiedel:
19.2
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
148.1
HPA sample
nTPM
gdT-cell nTPM: 59.6
Samples: 6
Max nTPM: 110.6
Min nTPM: 16.6
P10809_1007
45.1
P10809_1022
50.0
P10809_1041
100.9
P10809_1060
110.6
P10809_1077
16.6
P10809_1098
34.5
MAIT T-cell nTPM: 58.5
Samples: 6
Max nTPM: 86.4
Min nTPM: 25.2
P10809_1006
45.3
P10809_1024
71.2
P10809_1043
71.4
P10809_1062
86.4
P10809_1083
51.7
P10809_1097
25.2
Memory CD4 T-cell nTPM: 29.8
Samples: 6
Max nTPM: 116.9
Min nTPM: 3.4
P10809_1014
3.4
P10809_1026
3.9
P10809_1045
5.1
P10809_1064
116.9
P10809_1086
45.6
P10809_1113
4.1
Memory CD8 T-cell nTPM: 148.1
Samples: 5
Max nTPM: 366.2
Min nTPM: 59.9
P10809_1012
59.9
P10809_1027
366.2
P10809_1046
155.8
P10809_1065
93.1
P10809_1111
65.3
Naive CD4 T-cell nTPM: 7.0
Samples: 6
Max nTPM: 37.3
Min nTPM: 0.7
P10809_1015
0.9
P10809_1030
1.0
P10809_1049
1.2
P10809_1068
0.7
P10809_1085
37.3
P10809_1112
1.0
Naive CD8 T-cell nTPM: 55.1
Samples: 6
Max nTPM: 128.3
Min nTPM: 15.9
P10809_1016
16.2
P10809_1031
89.6
P10809_1050
47.0
P10809_1069
33.6
P10809_1087
128.3
P10809_1110
15.9
T-reg nTPM: 0.6
Samples: 6
Max nTPM: 1.9
Min nTPM: 0.0
P10809_1018
0.0
P10809_1037
0.0
P10809_1056
0.1
P10809_1075
0.1
P10809_1094
1.9
P10809_1106
1.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1440.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 78.2
Samples: 4
Max nTPM: 102.4
Min nTPM: 43.2
RHH5202_R3573
69.5
RHH5230_R3602
102.4
RHH5259_R3631
43.2
RHH5288_R3660
97.8
Effector memory CD8 T-cell nTPM: 307.6
Samples: 4
Max nTPM: 570.0
Min nTPM: 116.0
RHH5203_R3574
221.4
RHH5231_R3603
116.0
RHH5260_R3632
323.1
RHH5289_R3661
570.0
MAIT T-cell nTPM: 239.9
Samples: 4
Max nTPM: 311.5
Min nTPM: 140.8
RHH5233_R3605
246.3
RHH5205_R3576
140.8
RHH5262_R3634
311.5
RHH5297_R3663
260.8
Memory CD4 T-cell TFH nTPM: 6.4
Samples: 4
Max nTPM: 11.4
Min nTPM: 0.3
RHH5300_R3666
7.6
RHH5236_R3608
0.3
RHH5265_R3637
6.2
RHH5208_R3579
11.4
Memory CD4 T-cell Th1 nTPM: 24.1
Samples: 4
Max nTPM: 32.7
Min nTPM: 14.6
RHH5210_R3581
32.7
RHH5302_R3668
28.1
RHH5238_R3610
14.6
RHH5267_R3639
21.0
Memory CD4 T-cell Th1/Th17 nTPM: 20.6
Samples: 4
Max nTPM: 33.1
Min nTPM: 7.8
RHH5303_R3669
33.1
RHH5211_R3582
18.0
RHH5239_R3611
7.8
RHH5268_R3640
23.3
Memory CD4 T-cell Th17 nTPM: 25.8
Samples: 4
Max nTPM: 70.6
Min nTPM: 6.2
RHH5304_R3670
70.6
RHH5212_R3583
6.2
RHH5240_R3612
6.4
RHH5269_R3641
19.9
Memory CD4 T-cell Th2 nTPM: 19.8
Samples: 4
Max nTPM: 26.3
Min nTPM: 6.4
RHH5305_R3671
23.3
RHH5213_R3584
26.3
RHH5241_R3613
6.4
RHH5270_R3642
23.1
Naive CD4 T-cell nTPM: 11.7
Samples: 4
Max nTPM: 18.3
Min nTPM: 9.1
RHH5306_R3672
9.1
RHH5214_R3585
10.0
RHH5242_R3614
9.3
RHH5271_R3643
18.3
Naive CD8 T-cell nTPM: 5.3
Samples: 4
Max nTPM: 7.4
Min nTPM: 2.5
RHH5201_R3572
4.0
RHH5229_R3601
7.4
RHH5258_R3630
7.1
RHH5287_R3659
2.5
Non-Vd2 gdTCR nTPM: 1440.4
Samples: 4
Max nTPM: 2869.9
Min nTPM: 92.8
RHH5235_R3607
2606.4
RHH5264_R3636
2869.9
RHH5207_R3578
92.8
RHH5299_R3665
192.5
T-reg nTPM: 7.5
Samples: 4
Max nTPM: 10.5
Min nTPM: 3.8
RHH5301_R3667
5.9
RHH5237_R3609
9.7
RHH5266_R3638
10.5
RHH5209_R3580
3.8
Terminal effector memory CD4 T-cell nTPM: 27.9
Samples: 2
Max nTPM: 29.4
Min nTPM: 26.4
RHH5243_R3615
26.4
RHH5272_R3644
29.4
Terminal effector memory CD8 T-cell nTPM: 557.9
Samples: 4
Max nTPM: 1501.5
Min nTPM: 125.6
RHH5232_R3604
144.2
RHH5204_R3575
125.6
RHH5261_R3633
460.2
RHH5296_R3662
1501.5
Vd2 gdTCR nTPM: 140.3
Samples: 4
Max nTPM: 176.6
Min nTPM: 100.8
RHH5234_R3606
124.1
RHH5206_R3577
100.8
RHH5263_R3635
159.6
RHH5298_R3664
176.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
