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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
99.1
nTPM
Monaco:
41.6
nTPM
Schmiedel:
463.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
99.1
HPA sample
nTPM
gdT-cell nTPM: 54.6
Samples: 6
Max nTPM: 78.5
Min nTPM: 38.0
P10809_1007
57.3
P10809_1022
78.5
P10809_1041
55.3
P10809_1060
44.5
P10809_1077
38.0
P10809_1098
53.9
MAIT T-cell nTPM: 76.6
Samples: 6
Max nTPM: 105.5
Min nTPM: 46.3
P10809_1006
53.6
P10809_1024
85.3
P10809_1043
83.7
P10809_1062
85.3
P10809_1083
46.3
P10809_1097
105.5
Memory CD4 T-cell nTPM: 88.6
Samples: 6
Max nTPM: 138.3
Min nTPM: 50.3
P10809_1014
50.3
P10809_1026
119.8
P10809_1045
138.3
P10809_1064
50.8
P10809_1086
50.6
P10809_1113
121.8
Memory CD8 T-cell nTPM: 64.4
Samples: 5
Max nTPM: 95.2
Min nTPM: 36.4
P10809_1012
45.0
P10809_1027
60.8
P10809_1046
95.2
P10809_1065
36.4
P10809_1111
84.8
Naive CD4 T-cell nTPM: 99.1
Samples: 6
Max nTPM: 128.5
Min nTPM: 60.4
P10809_1015
60.4
P10809_1030
118.9
P10809_1049
124.6
P10809_1068
93.9
P10809_1085
68.4
P10809_1112
128.5
Naive CD8 T-cell nTPM: 70.1
Samples: 6
Max nTPM: 100.2
Min nTPM: 31.3
P10809_1016
72.3
P10809_1031
82.1
P10809_1050
67.5
P10809_1069
67.4
P10809_1087
31.3
P10809_1110
100.2
T-reg nTPM: 61.1
Samples: 6
Max nTPM: 84.6
Min nTPM: 38.5
P10809_1018
38.5
P10809_1037
76.0
P10809_1056
48.6
P10809_1075
50.4
P10809_1094
84.6
P10809_1106
68.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
41.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 25.7
Samples: 4
Max nTPM: 31.9
Min nTPM: 19.0
RHH5202_R3573
19.0
RHH5230_R3602
31.9
RHH5259_R3631
31.0
RHH5288_R3660
20.7
Effector memory CD8 T-cell nTPM: 14.3
Samples: 4
Max nTPM: 15.4
Min nTPM: 13.4
RHH5203_R3574
13.4
RHH5231_R3603
15.0
RHH5260_R3632
15.4
RHH5289_R3661
13.4
MAIT T-cell nTPM: 25.1
Samples: 4
Max nTPM: 28.2
Min nTPM: 21.5
RHH5233_R3605
21.5
RHH5205_R3576
28.0
RHH5262_R3634
28.2
RHH5297_R3663
22.8
Memory CD4 T-cell TFH nTPM: 18.6
Samples: 4
Max nTPM: 31.2
Min nTPM: 3.6
RHH5300_R3666
31.2
RHH5236_R3608
3.6
RHH5265_R3637
26.0
RHH5208_R3579
13.6
Memory CD4 T-cell Th1 nTPM: 36.1
Samples: 4
Max nTPM: 51.5
Min nTPM: 22.4
RHH5210_R3581
22.4
RHH5302_R3668
34.4
RHH5238_R3610
51.5
RHH5267_R3639
35.9
Memory CD4 T-cell Th1/Th17 nTPM: 24.9
Samples: 4
Max nTPM: 34.1
Min nTPM: 12.9
RHH5303_R3669
20.3
RHH5211_R3582
12.9
RHH5239_R3611
32.3
RHH5268_R3640
34.1
Memory CD4 T-cell Th17 nTPM: 30.8
Samples: 4
Max nTPM: 48.3
Min nTPM: 19.0
RHH5304_R3670
48.3
RHH5212_R3583
19.0
RHH5240_R3612
28.4
RHH5269_R3641
27.3
Memory CD4 T-cell Th2 nTPM: 39.5
Samples: 4
Max nTPM: 53.4
Min nTPM: 29.2
RHH5305_R3671
53.4
RHH5213_R3584
29.2
RHH5241_R3613
39.4
RHH5270_R3642
35.9
Naive CD4 T-cell nTPM: 41.7
Samples: 4
Max nTPM: 58.2
Min nTPM: 29.2
RHH5306_R3672
58.2
RHH5214_R3585
29.2
RHH5242_R3614
42.9
RHH5271_R3643
36.3
Naive CD8 T-cell nTPM: 39.2
Samples: 4
Max nTPM: 53.7
Min nTPM: 28.2
RHH5201_R3572
28.2
RHH5229_R3601
53.7
RHH5258_R3630
31.1
RHH5287_R3659
43.7
Non-Vd2 gdTCR nTPM: 18.1
Samples: 4
Max nTPM: 22.4
Min nTPM: 14.7
RHH5235_R3607
22.4
RHH5264_R3636
17.6
RHH5207_R3578
14.7
RHH5299_R3665
17.6
T-reg nTPM: 26.3
Samples: 4
Max nTPM: 44.6
Min nTPM: 14.8
RHH5301_R3667
30.5
RHH5237_R3609
15.4
RHH5266_R3638
44.6
RHH5209_R3580
14.8
Terminal effector memory CD4 T-cell nTPM: 19.0
Samples: 2
Max nTPM: 21.6
Min nTPM: 16.3
RHH5243_R3615
21.6
RHH5272_R3644
16.3
Terminal effector memory CD8 T-cell nTPM: 25.2
Samples: 4
Max nTPM: 29.3
Min nTPM: 19.1
RHH5232_R3604
19.1
RHH5204_R3575
26.1
RHH5261_R3633
29.3
RHH5296_R3662
26.2
Vd2 gdTCR nTPM: 29.5
Samples: 4
Max nTPM: 35.8
Min nTPM: 25.2
RHH5234_R3606
25.2
RHH5206_R3577
29.0
RHH5263_R3635
28.0
RHH5298_R3664
35.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
