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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
146.2
nTPM
Monaco:
18.0
nTPM
Schmiedel:
16.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
146.2
HPA sample
nTPM
gdT-cell nTPM: 87.3
Samples: 6
Max nTPM: 125.2
Min nTPM: 68.1
P10809_1007
68.1
P10809_1022
70.5
P10809_1041
86.7
P10809_1060
82.2
P10809_1077
91.1
P10809_1098
125.2
MAIT T-cell nTPM: 118.7
Samples: 6
Max nTPM: 179.4
Min nTPM: 64.9
P10809_1006
64.9
P10809_1024
108.3
P10809_1043
130.1
P10809_1062
116.5
P10809_1083
112.9
P10809_1097
179.4
Memory CD4 T-cell nTPM: 123.6
Samples: 6
Max nTPM: 152.2
Min nTPM: 92.0
P10809_1014
92.0
P10809_1026
131.1
P10809_1045
125.4
P10809_1064
114.3
P10809_1086
126.6
P10809_1113
152.2
Memory CD8 T-cell nTPM: 100.9
Samples: 5
Max nTPM: 114.5
Min nTPM: 76.1
P10809_1012
76.1
P10809_1027
112.6
P10809_1046
100.7
P10809_1065
100.5
P10809_1111
114.5
Naive CD4 T-cell nTPM: 146.2
Samples: 6
Max nTPM: 202.8
Min nTPM: 106.3
P10809_1015
106.3
P10809_1030
143.5
P10809_1049
202.8
P10809_1068
131.9
P10809_1085
128.0
P10809_1112
164.9
Naive CD8 T-cell nTPM: 126.1
Samples: 6
Max nTPM: 172.3
Min nTPM: 100.3
P10809_1016
119.6
P10809_1031
142.0
P10809_1050
100.3
P10809_1069
107.4
P10809_1087
115.0
P10809_1110
172.3
T-reg nTPM: 137.7
Samples: 6
Max nTPM: 192.8
Min nTPM: 93.8
P10809_1018
93.8
P10809_1037
124.6
P10809_1056
192.8
P10809_1075
132.7
P10809_1094
140.6
P10809_1106
141.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
18.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 18.1
Samples: 4
Max nTPM: 23.1
Min nTPM: 13.2
RHH5202_R3573
13.2
RHH5230_R3602
22.0
RHH5259_R3631
23.1
RHH5288_R3660
13.9
Effector memory CD8 T-cell nTPM: 12.0
Samples: 4
Max nTPM: 28.9
Min nTPM: 2.5
RHH5203_R3574
5.7
RHH5231_R3603
2.5
RHH5260_R3632
28.9
RHH5289_R3661
11.0
MAIT T-cell nTPM: 12.7
Samples: 4
Max nTPM: 20.2
Min nTPM: 9.0
RHH5233_R3605
11.9
RHH5205_R3576
20.2
RHH5262_R3634
9.0
RHH5297_R3663
9.8
Memory CD4 T-cell TFH nTPM: 16.0
Samples: 4
Max nTPM: 24.3
Min nTPM: 8.6
RHH5300_R3666
24.3
RHH5236_R3608
17.0
RHH5265_R3637
14.1
RHH5208_R3579
8.6
Memory CD4 T-cell Th1 nTPM: 18.0
Samples: 4
Max nTPM: 35.5
Min nTPM: 6.7
RHH5210_R3581
6.7
RHH5302_R3668
14.0
RHH5238_R3610
35.5
RHH5267_R3639
15.7
Memory CD4 T-cell Th1/Th17 nTPM: 12.9
Samples: 4
Max nTPM: 19.3
Min nTPM: 5.4
RHH5303_R3669
5.4
RHH5211_R3582
12.5
RHH5239_R3611
14.5
RHH5268_R3640
19.3
Memory CD4 T-cell Th17 nTPM: 15.5
Samples: 4
Max nTPM: 26.9
Min nTPM: 4.5
RHH5304_R3670
26.9
RHH5212_R3583
4.5
RHH5240_R3612
18.6
RHH5269_R3641
12.0
Memory CD4 T-cell Th2 nTPM: 13.3
Samples: 4
Max nTPM: 20.3
Min nTPM: 9.1
RHH5305_R3671
20.3
RHH5213_R3584
10.2
RHH5241_R3613
9.1
RHH5270_R3642
13.4
Naive CD4 T-cell nTPM: 16.2
Samples: 4
Max nTPM: 20.8
Min nTPM: 9.2
RHH5306_R3672
19.0
RHH5214_R3585
15.9
RHH5242_R3614
9.2
RHH5271_R3643
20.8
Naive CD8 T-cell nTPM: 16.6
Samples: 4
Max nTPM: 24.4
Min nTPM: 10.9
RHH5201_R3572
10.9
RHH5229_R3601
19.4
RHH5258_R3630
11.5
RHH5287_R3659
24.4
Non-Vd2 gdTCR nTPM: 13.5
Samples: 4
Max nTPM: 19.4
Min nTPM: 10.0
RHH5235_R3607
11.1
RHH5264_R3636
19.4
RHH5207_R3578
13.3
RHH5299_R3665
10.0
T-reg nTPM: 16.3
Samples: 4
Max nTPM: 22.2
Min nTPM: 10.2
RHH5301_R3667
12.5
RHH5237_R3609
20.2
RHH5266_R3638
22.2
RHH5209_R3580
10.2
Terminal effector memory CD4 T-cell nTPM: 12.0
Samples: 2
Max nTPM: 14.5
Min nTPM: 9.4
RHH5243_R3615
14.5
RHH5272_R3644
9.4
Terminal effector memory CD8 T-cell nTPM: 10.4
Samples: 4
Max nTPM: 12.9
Min nTPM: 6.9
RHH5232_R3604
6.9
RHH5204_R3575
12.6
RHH5261_R3633
12.9
RHH5296_R3662
9.2
Vd2 gdTCR nTPM: 16.0
Samples: 4
Max nTPM: 28.4
Min nTPM: 7.5
RHH5234_R3606
7.5
RHH5206_R3577
28.4
RHH5263_R3635
20.3
RHH5298_R3664
7.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
