HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:15.6 nTPM
HPA Brain:20.4 nTPM
GTEx:15.6 nTPM
FANTOM5:10.6 Scaled Tags Per Million
Pig:22.9 nTPM
Mouse:45.6 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034677Antibody HPA034678
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.4
Sample id Sample description nTPM
Hippocampus
nTPM: 17.9
1898 Male, age 80, left hemisphere 20.0
2529 Female, age 94, left hemisphere 20.0
2621 Female, age 67, right hemisphere 18.1
1911 Female, age 85, right hemisphere 17.1
2148 Female, age 91, left hemisphere 16.3
1855 Male, age 76, left hemisphere 16.0
Dentate gyrus
nTPM: 17.6
2530 Female, age 94, left hemisphere 20.8
2010 Male, age 76, both hemispheres 18.7
2246 Female, age 85, both hemispheres 17.7
2528 Male, age 74, both hemispheres 17.4
2531 Female, age 67, both hemispheres 17.1
1927 Female, age 91, both hemispheres 13.8
Entorhinal gyrus
nTPM: 20.2
2117 Female, age 91, right hemisphere 24.7
1938 Female, age 85, left hemisphere 21.1
1787 Male, age 76, left hemisphere 20.5
2613 Female, age 94, left hemisphere 20.5
2764 Male, age 80, right hemisphere 18.3
2686 Male, age 75, right hemisphere 16.4
Hippocampus, CA1
nTPM: 16.5
2527 Male, age 74, both hemispheres 19.2
2082 Female, age 91, right hemisphere 18.2
1873 Female, age 85, both hemispheres 16.8
2045 Male, age 76, both hemispheres 16.2
2749 Male, age 80, left hemisphere 11.8
Hippocampus, CA2
nTPM: 19.2
2249 Male, age 74, both hemispheres 23.6
1940 Female, age 85, left hemisphere 19.5
1963 Male, age 80, left hemisphere 19.5
2437 Female, age 94, left hemisphere 19.1
2113 Female, age 91, right hemisphere 17.2
1892 Male, age 76, both hemispheres 16.5
Hippocampus, CA3
nTPM: 20.0
2436 Male, age 74, both hemispheres 33.8
1867 Male, age 76, both hemispheres 20.0
1891 Female, age 85, both hemispheres 19.7
2620 Female, age 94, left hemisphere 17.4
2861 Female, age 67, both hemispheres 17.0
2137 Male, age 80, left hemisphere 12.2
Parahippocampal cortex
nTPM: 17.0
1990 Female, age 91, right hemisphere 20.7
2018 Male, age 76, both hemispheres 20.0
1933 Female, age 85, both hemispheres 19.2
2250 Female, age 67, right hemisphere 18.9
2532 Female, age 72, left hemisphere 17.5
1850 Male, age 80, both hemispheres 16.5
2692 Male, age 74, both hemispheres 15.3
2622 Female, age 67, right hemisphere 14.5
2245 Female, age 91, both hemispheres 13.9
2693 Female, age 94, both hemispheres 13.9
Perirhinal gyrus
nTPM: 18.2
1841 Female, age 85, right hemisphere 19.9
1847 Female, age 91, left hemisphere 18.6
2521 Female, age 94, right hemisphere 18.4
2848 Male, age 76, right hemisphere 17.5
1794 Male, age 80, right hemisphere 16.5
Subiculum
nTPM: 20.4
2042 Male, age 76, both hemispheres 23.3
1977 Female, age 85, both hemispheres 22.9
1901 Male, age 80, both hemispheres 20.5
2619 Male, age 74, both hemispheres 20.3
2729 Female, age 91, right hemisphere 18.2
2438 Female, age 94, left hemisphere 17.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.6
Samples: 197

Max nTPM: 38.8
Min nTPM: 7.5
Std nTPM: 4.9
Median nTPM: 14.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 38.8
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 36.0
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 28.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 28.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 28.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 28.2
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 27.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 27.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 27.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 27.1
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 26.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.6
FF:10153-102I9 76 years, female 15.1
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.9
Pig sample Sample description nTPM
Subiculum
nTPM: 20.1
Samples: 4

Max nTPM: 23.7
Min nTPM: 18.0
Sample A Female 23.7
Sample B Female 18.0
Sample C Male 20.3
Sample D Male 18.5
Dorsal hippocampus
nTPM: 22.5
Samples: 4

Max nTPM: 29.0
Min nTPM: 16.6
Sample A Female 29.0
Sample B Female 24.8
Sample C Male 19.5
Sample D Male 16.6
Entorhinal cortex
nTPM: 18.9
Samples: 4

Max nTPM: 22.6
Min nTPM: 15.7
Sample A Female 22.6
Sample B Female 17.0
Sample C Male 20.3
Sample D Male 15.7
Ventral hippocampus
nTPM: 22.9
Samples: 4

Max nTPM: 26.5
Min nTPM: 16.8
Sample A Female 21.9
Sample B Female 16.8
Sample C Male 26.2
Sample D Male 26.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.6
Samples: 4

Max nTPM: 51.2
Min nTPM: 42.7
Sample A Male 43.6
Sample B Male 42.7
Sample C Female 45.0
Sample D Female 51.2
Hippocampal formation
nTPM: 41.8
Samples: 4

Max nTPM: 43.1
Min nTPM: 39.4
Sample A Male 42.5
Sample B Male 43.1
Sample C Female 39.4
Sample D Female 42.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
68342378 Antisense, RP_041214_01_C07, Mouse strain C57BL/6J (56 days, male) 2.8

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