HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:20.9 nTPM
HPA Brain:30.9 nTPM
GTEx:20.9 nTPM
FANTOM5:39.4 Scaled Tags Per Million
Pig:18.7 nTPM
Mouse:33.1 nTPM
Allen mouse:3.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057922
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.9
Sample id Sample description nTPM
Hippocampus
nTPM: 28.7
1898 Male, age 80, left hemisphere 32.4
2621 Female, age 67, right hemisphere 29.7
2529 Female, age 94, left hemisphere 28.9
2148 Female, age 91, left hemisphere 28.1
1911 Female, age 85, right hemisphere 26.7
1855 Male, age 76, left hemisphere 26.5
Dentate gyrus
nTPM: 26.0
2010 Male, age 76, both hemispheres 28.7
2530 Female, age 94, left hemisphere 27.0
1927 Female, age 91, both hemispheres 26.6
2528 Male, age 74, both hemispheres 25.2
2246 Female, age 85, both hemispheres 24.5
2531 Female, age 67, both hemispheres 24.1
Entorhinal gyrus
nTPM: 30.9
2764 Male, age 80, right hemisphere 34.8
2117 Female, age 91, right hemisphere 33.9
2613 Female, age 94, left hemisphere 31.7
1938 Female, age 85, left hemisphere 30.1
2686 Male, age 75, right hemisphere 27.6
1787 Male, age 76, left hemisphere 27.0
Hippocampus, CA1
nTPM: 27.3
2749 Male, age 80, left hemisphere 32.4
1873 Female, age 85, both hemispheres 27.4
2527 Male, age 74, both hemispheres 27.4
2045 Male, age 76, both hemispheres 27.3
2082 Female, age 91, right hemisphere 21.8
Hippocampus, CA2
nTPM: 28.3
1963 Male, age 80, left hemisphere 31.2
1892 Male, age 76, both hemispheres 31.1
2249 Male, age 74, both hemispheres 29.6
1940 Female, age 85, left hemisphere 29.5
2437 Female, age 94, left hemisphere 25.2
2113 Female, age 91, right hemisphere 23.2
Hippocampus, CA3
nTPM: 27.6
1867 Male, age 76, both hemispheres 33.5
2620 Female, age 94, left hemisphere 31.4
2861 Female, age 67, both hemispheres 27.2
1891 Female, age 85, both hemispheres 26.7
2137 Male, age 80, left hemisphere 24.7
2436 Male, age 74, both hemispheres 22.4
Parahippocampal cortex
nTPM: 28.7
1850 Male, age 80, both hemispheres 32.1
1990 Female, age 91, right hemisphere 31.0
2532 Female, age 72, left hemisphere 30.5
1933 Female, age 85, both hemispheres 30.1
2622 Female, age 67, right hemisphere 28.9
2245 Female, age 91, both hemispheres 27.6
2693 Female, age 94, both hemispheres 27.1
2692 Male, age 74, both hemispheres 26.9
2018 Male, age 76, both hemispheres 26.5
2250 Female, age 67, right hemisphere 26.0
Perirhinal gyrus
nTPM: 30.2
1794 Male, age 80, right hemisphere 33.1
2521 Female, age 94, right hemisphere 32.7
1847 Female, age 91, left hemisphere 30.7
1841 Female, age 85, right hemisphere 29.6
2848 Male, age 76, right hemisphere 25.0
Subiculum
nTPM: 29.2
1901 Male, age 80, both hemispheres 32.2
1977 Female, age 85, both hemispheres 31.8
2042 Male, age 76, both hemispheres 29.5
2619 Male, age 74, both hemispheres 28.3
2729 Female, age 91, right hemisphere 27.0
2438 Female, age 94, left hemisphere 26.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.9
Samples: 197

Max nTPM: 37.7
Min nTPM: 12.5
Std nTPM: 3.4
Median nTPM: 20.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 37.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 31.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 30.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 30.1
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 29.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 28.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 28.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 28.5
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 27.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 27.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 27.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.4
FF:10169-103B7 60 years, female 44.6
FF:10153-102I9 76 years, female 34.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.7
Pig sample Sample description nTPM
Subiculum
nTPM: 17.0
Samples: 4

Max nTPM: 18.3
Min nTPM: 15.9
Sample A Female 18.3
Sample B Female 17.0
Sample C Male 16.6
Sample D Male 15.9
Dorsal hippocampus
nTPM: 18.7
Samples: 4

Max nTPM: 19.7
Min nTPM: 17.4
Sample A Female 19.7
Sample B Female 18.9
Sample C Male 18.6
Sample D Male 17.4
Entorhinal cortex
nTPM: 17.4
Samples: 4

Max nTPM: 18.3
Min nTPM: 16.6
Sample A Female 18.3
Sample B Female 17.5
Sample C Male 17.0
Sample D Male 16.6
Ventral hippocampus
nTPM: 17.0
Samples: 4

Max nTPM: 18.1
Min nTPM: 15.4
Sample A Female 18.1
Sample B Female 15.4
Sample C Male 17.7
Sample D Male 16.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.2
Samples: 4

Max nTPM: 36.5
Min nTPM: 31.2
Sample A Male 31.9
Sample B Male 33.0
Sample C Female 31.2
Sample D Female 36.5
Hippocampal formation
nTPM: 31.4
Samples: 4

Max nTPM: 32.9
Min nTPM: 30.0
Sample A Male 30.0
Sample B Male 32.9
Sample C Female 32.5
Sample D Female 30.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.2
69818212 Antisense, RP_050510_04_F07, Mouse strain C57BL/6J (56 days, male) 3.2

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