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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
34.1
nTPM
Monaco:
15.9
nTPM
Schmiedel:
13.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
34.1
HPA sample
nTPM
gdT-cell nTPM: 26.8
Samples: 6
Max nTPM: 35.1
Min nTPM: 14.4
P10809_1007
14.4
P10809_1022
27.0
P10809_1041
27.7
P10809_1060
35.1
P10809_1077
23.3
P10809_1098
33.4
MAIT T-cell nTPM: 20.8
Samples: 6
Max nTPM: 32.2
Min nTPM: 13.8
P10809_1006
13.8
P10809_1024
32.2
P10809_1043
16.4
P10809_1062
24.5
P10809_1083
16.9
P10809_1097
21.0
Memory CD4 T-cell nTPM: 24.1
Samples: 6
Max nTPM: 32.7
Min nTPM: 13.5
P10809_1014
13.5
P10809_1026
21.0
P10809_1045
27.8
P10809_1064
32.7
P10809_1086
23.1
P10809_1113
26.7
Memory CD8 T-cell nTPM: 26.0
Samples: 5
Max nTPM: 38.1
Min nTPM: 13.3
P10809_1012
13.3
P10809_1027
38.1
P10809_1046
31.4
P10809_1065
17.5
P10809_1111
29.5
Naive CD4 T-cell nTPM: 20.8
Samples: 6
Max nTPM: 28.7
Min nTPM: 10.0
P10809_1015
10.0
P10809_1030
24.9
P10809_1049
28.7
P10809_1068
16.0
P10809_1085
18.5
P10809_1112
26.5
Naive CD8 T-cell nTPM: 20.0
Samples: 6
Max nTPM: 26.6
Min nTPM: 12.2
P10809_1016
12.2
P10809_1031
21.6
P10809_1050
21.9
P10809_1069
19.1
P10809_1087
26.6
P10809_1110
18.8
T-reg nTPM: 34.1
Samples: 6
Max nTPM: 58.4
Min nTPM: 19.6
P10809_1018
19.6
P10809_1037
32.7
P10809_1056
58.4
P10809_1075
28.3
P10809_1094
34.0
P10809_1106
31.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
15.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 3.4
Samples: 4
Max nTPM: 7.1
Min nTPM: 0.0
RHH5202_R3573
0.5
RHH5230_R3602
0.0
RHH5259_R3631
7.1
RHH5288_R3660
6.0
Effector memory CD8 T-cell nTPM: 7.6
Samples: 4
Max nTPM: 10.9
Min nTPM: 2.9
RHH5203_R3574
7.5
RHH5231_R3603
9.1
RHH5260_R3632
10.9
RHH5289_R3661
2.9
MAIT T-cell nTPM: 9.5
Samples: 4
Max nTPM: 23.7
Min nTPM: 1.0
RHH5233_R3605
1.0
RHH5205_R3576
1.9
RHH5262_R3634
11.2
RHH5297_R3663
23.7
Memory CD4 T-cell TFH nTPM: 10.4
Samples: 4
Max nTPM: 25.2
Min nTPM: 0.0
RHH5300_R3666
8.2
RHH5236_R3608
25.2
RHH5265_R3637
8.3
RHH5208_R3579
0.0
Memory CD4 T-cell Th1 nTPM: 15.9
Samples: 4
Max nTPM: 21.8
Min nTPM: 11.8
RHH5210_R3581
13.8
RHH5302_R3668
16.2
RHH5238_R3610
21.8
RHH5267_R3639
11.8
Memory CD4 T-cell Th1/Th17 nTPM: 3.8
Samples: 4
Max nTPM: 8.3
Min nTPM: 0.7
RHH5303_R3669
0.7
RHH5211_R3582
5.1
RHH5239_R3611
1.0
RHH5268_R3640
8.3
Memory CD4 T-cell Th17 nTPM: 5.5
Samples: 4
Max nTPM: 11.7
Min nTPM: 0.6
RHH5304_R3670
0.6
RHH5212_R3583
11.7
RHH5240_R3612
0.6
RHH5269_R3641
8.9
Memory CD4 T-cell Th2 nTPM: 9.5
Samples: 4
Max nTPM: 16.6
Min nTPM: 0.3
RHH5305_R3671
16.6
RHH5213_R3584
11.4
RHH5241_R3613
0.3
RHH5270_R3642
9.8
Naive CD4 T-cell nTPM: 6.0
Samples: 4
Max nTPM: 10.2
Min nTPM: 0.0
RHH5306_R3672
10.2
RHH5214_R3585
8.9
RHH5242_R3614
4.9
RHH5271_R3643
0.0
Naive CD8 T-cell nTPM: 9.0
Samples: 4
Max nTPM: 16.0
Min nTPM: 0.0
RHH5201_R3572
0.0
RHH5229_R3601
5.2
RHH5258_R3630
14.7
RHH5287_R3659
16.0
Non-Vd2 gdTCR nTPM: 8.6
Samples: 4
Max nTPM: 23.1
Min nTPM: 0.0
RHH5235_R3607
8.2
RHH5264_R3636
0.0
RHH5207_R3578
3.0
RHH5299_R3665
23.1
T-reg nTPM: 10.7
Samples: 4
Max nTPM: 25.9
Min nTPM: 2.1
RHH5301_R3667
25.9
RHH5237_R3609
6.4
RHH5266_R3638
2.1
RHH5209_R3580
8.2
Terminal effector memory CD4 T-cell nTPM: 7.2
Samples: 2
Max nTPM: 10.1
Min nTPM: 4.2
RHH5243_R3615
10.1
RHH5272_R3644
4.2
Terminal effector memory CD8 T-cell nTPM: 12.9
Samples: 4
Max nTPM: 23.4
Min nTPM: 3.3
RHH5232_R3604
7.0
RHH5204_R3575
23.4
RHH5261_R3633
17.8
RHH5296_R3662
3.3
Vd2 gdTCR nTPM: 15.0
Samples: 4
Max nTPM: 25.5
Min nTPM: 8.4
RHH5234_R3606
8.4
RHH5206_R3577
25.5
RHH5263_R3635
9.8
RHH5298_R3664
16.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
